Treponema ruminis: DYE50_00005
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Entry
DYE50_00005 CDS
T07166
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
tri
Treponema ruminis
Pathway
tri00220
Arginine biosynthesis
tri00791
Atrazine degradation
tri01100
Metabolic pathways
tri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
DYE50_00005
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
DYE50_00005
Enzymes [BR:
tri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
DYE50_00005
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HATPase_c
HisKA
Dala_Dala_lig_C
ATP-grasp
RimK
HATPase_c_5
ATP-grasp_5
ATPgrasp_Ter
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QSI00963
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All DBs
Position
complement(join(2894925..2895582,1..2210))
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AA seq
955 aa
AA seq
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MVKKVMIANRGAIAVRIERTLKKMGITSVAIYSQADQDSLHVNNADEAYFLGDGKVSDTY
LNTDLILKIAKEHGVDAIHPGYGFLSENADFARICEQNGIKFIGPTPEQMKMFGLKHSAR
EIAKKAKVPMLEGTPLLSGADEAVKAAENFGYPVILKSTAGGGGIGMKVCYSEEELRAAY
DACTHLAKANFSNAGVFLEKYLEKARHIEVQIFGNEYGEVAALAERDCSVQRRNQKVMEE
CPAYGISEETRKALKDAAKRLAVEVGYRSAGTVEFLYDVKSQGFYFLEVNTRLQVEHGVT
EEVLGIDLVEWMVREASGELKNLDSLYGKTNGVSIQTRIYAEDGKRNFATSAGKLDTVIF
SKDARIETWIKDAVVVSPNYDPMLAKIIVHADDRKSAIAKMTKVLEETKIYGITTNIDYL
HSFLQTKPYLEGNLFTHMLDDFTYSENTVEVLDGGLQTTVQDYPGRLKYWDIGVPPSGAM
DNFSFRLANIILGNSAGLPGLEFTLKGGKYKFRADMTICLTGCDMSPTLDDLEIPMYKPV
SVKEGQILALSKAKSGLRAYMAVKGGLDVPEYLGSASTFALGGFGGHSGRVLRTGDILHV
KKDTSPLPNITVDSSYLSTANEISVVPGPHCTKEFLKPEFMEQLSETEWEVHFNSDRTGV
RLIGPSPAWAREDGGEAGLHPSNVHDTAYAVGTIDMTGDMPIILGPDGPSLGGFVCPATI
PSGELWKQGQLAPGSKVRQQQFTADCSHELKTPLAAIRANADLIEAKQGPSRELDAIQTE
AETMGNLIGELLTLAKLDEVDQRASFVSLDLSEMASNIAMLMEALLDEKTQKLERNIEPH
VMVKGSKRNLQKLISSLLENAASHAPEQSTVTIMVGSRHGHAILSVANPSEEIPKEHLAH
LFDRFYQANPESSSSSNFGLGLAIAKSIAETHGGAIAAAWDDGLLTFTVTLPLQS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaaggtaatgatagcgaaccgcggagctattgcggtcagaattgaaagaact
ctcaaaaagatgggcattacttccgttgcgatttattcgcaggcagatcaggacagcctt
catgtaaataatgccgatgaagcatattttcttggagacggaaaagtttctgacacatat
ttgaatacagatctgattcttaaaattgcgaaagaacatggagttgatgcgattcaccct
ggttacggatttttgagtgaaaacgctgattttgcgcgaatttgtgagcagaatggaata
aagttcatcggtccgactccagagcaaatgaaaatgttcggccttaagcacagtgcccgc
gaaattgcaaaaaaggcaaaagttcccatgcttgaaggaactcccctgctttcgggcgca
gacgaagctgtaaaagccgcagagaatttcggttatccggtaattttaaaaagtacggcg
ggcggcggcggaatcggaatgaaagtctgttattcagaagaagaacttagagccgcttat
gatgcctgtactcaccttgcgaaagctaatttttctaacgcaggcgtttttcttgagaaa
tatcttgaaaaagcaaggcatattgaagttcagatttttggaaatgaatatggggaagtt
gctgctcttgcagaacgcgattgttcggttcagcgtcgaaatcaaaaagtcatggaagaa
tgtccggcttacgggatttccgaagaaacaagaaaggctcttaaagatgccgcaaaacgt
cttgcagttgaagttggttatcgttcagctggtacagtagaattcctttatgatgttaaa
tctcagggattttatttcctcgaagtaaatactcgtcttcaagttgagcacggagttacg
gaggaagttcttggaattgatctcgttgagtggatggttcgtgaggcttctggtgagctt
aagaatcttgattcactttacggaaaaacaaatggagttagtattcagacccgaatttat
gctgaagacggaaaaagaaatttcgccacaagtgcaggaaagttagacacagtaattttc
tcaaaagatgcccgaattgaaacatggattaaggatgctgtggttgtctcaccgaactac
gatcctatgcttgcgaaaattattgtccacgcagatgacagaaagagcgcgattgcaaaa
atgacaaaagttcttgaggaaacaaagatttacggtatcactacaaatatcgattacctt
cattccttcctccagacaaagccttatcttgaaggcaatctttttacacacatgctggat
gattttacatattccgaaaatacggttgaagttcttgacggtggacttcagacgacagtt
caggattatccgggacgattaaaatactgggatatcggagttccaccgagcggagcaatg
gataatttcagttttcgtctggcaaacattattcttggaaactcagctggacttccgggg
cttgaatttacgctcaaaggcggaaagtacaaattccgtgcggacatgacaatttgtttg
actggctgcgatatgtctccgactctggatgatttggaaatcccaatgtataagcctgtt
tctgtaaaagaaggacaaattcttgcgctttcaaaagcaaaatctggtttacgcgcatac
atggctgtaaaaggcggacttgatgttccggagtatctgggttcggcatcgacatttgca
ctgggcggatttggtggacattcaggacgagttctcaggacaggtgatattcttcatgtc
aaaaaagatacaagccctcttccaaatataacagttgattcttcatatctttcaacggca
aatgaaatttctgttgttccgggaccacactgtacaaaagaattcctaaaaccagaattt
atggaacagctttctgaaacggaatgggaagttcactttaactcggacaggacaggcgtt
cgtcttatcggcccgagtcctgcatgggcccgcgaagatggcggtgaggctggacttcat
ccatcgaatgttcacgatacggcttatgcggtcggcacaatcgatatgacaggtgatatg
ccgattattcttggtcctgacggcccttctctcggaggatttgtatgtcctgcaacaatt
ccttctggtgagctttggaaacagggacagcttgccccaggaagcaaagtgcgccagcag
cagttcaccgcagactgcagccacgagctgaaaacccctcttgccgccatccgggccaat
gccgacctcatcgaggcaaaacagggaccaagcagggaactggacgcaatccagaccgag
gcggagacgatgggaaacctgattggggaactgctcaccctggcgaaactcgacgaggtg
gaccagagggcttcgttcgtcagcctggacctttcggagatggcatccaacatcgcaatg
ctgatggaggctctgctcgatgagaaaacccagaagctcgaaaggaacatcgagccgcac
gtgatggtgaagggttccaaacgcaacctgcagaagctgatttcctcgctgttggaaaac
gcggcaagccacgctcccgaacaaagcaccgtcaccatcatggtgggctcacgccatgga
catgcgatcctttcggtggccaaccccagcgaagagattcccaaggagcatcttgcccac
ctgttcgaccgcttctatcaggccaaccccgaaagcagttccagctcgaacttcggcctg
gggctggcaatcgccaaaagcatcgccgaaacccatggtggcgccatcgcggccgcttgg
gacgacgggcttctgaccttcacggtcaccttgccgcttcagtcctga
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