Treponema ruminis: DYE50_02030
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Entry
DYE50_02030 CDS
T07166
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
tri
Treponema ruminis
Pathway
tri00040
Pentose and glucuronate interconversions
tri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DYE50_02030
Enzymes [BR:
tri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
DYE50_02030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QSI01361
LinkDB
All DBs
Position
complement(432246..435350)
Genome browser
AA seq
1034 aa
AA seq
DB search
MKKIILACAVALLAVAGSFADKKPWNEVAAPEITKIEQTGPNEIKVSFKSNTSKDAADKG
YVSYKSDSGASGKEAYGRTRKEAKTATFNLQKTGTYTFIAYAERNGESEKHASAPVTFKY
SLPLGKALLMARNLGSGKVLVSWSQVPEAEGYILSYTDENGKKVSLPKTKELQAEVSIPA
GTVSSFTVSAVRGNESFPSDTIKKTVREQAERVWNFTEFGTSTNPGRNNFQLLDSDNLKV
KLNSCTFDPATGTIIDKGGKFETFFDGISFYYTELDPFKENFELTATVTVDYHNPTADGQ
EGFGLLAIDRLGIDGESMVIAYNNSAGVISRKFTTHVNGVKKEIKDGLGSRFVSGITDSI
IEEGDAAIKNKCSSVSKAFSYDQASDAIKTGDVYRITLKKDNTGYHAIYKRAIASEDSVE
EFLMYDTENKKLTQLDPEHIYVGFAVARGCNATFSDVEFKVTDPKNDPPALEEPPELVPL
TTLIDCPVTWYNQEYPFVFNANSNGTIHVEDTKGRVLIASGKVEAKKDFKKVIKINKGNN
DLIVTFDPEDGFKPEPKQVIAQFNKNLDVNAYEENYNPVTYSHTVISMTFSGKYLYVSKE
GSVFGKGTKDDPLDLLSAIQYVKPGQTILLAPGKYYPSSSLWIERGNNGSETERKVLMSE
DPAKRAIIDFSSAKTGTTAFNLFGNYWTIQNIDITGTPDDCKALQIAGNYNRIIMVDTYL
NGDTGIQISGRASEPAEKWPSYNLVYGCESFGNCDPAQNNADGFASKLTSGEGNVFRNCV
AHHNVDDGWDLYAKIETGPIGAVIIDNCIAYNNGRKIDNTGKGDGNGFKLGGDGIAVKHI
IRNSISFNNDLNGITTNSNPALIVENCTAYGNKVSNLNLYGKGNADQYPRTVQVKGMLSA
AGLGRDRFDESKDPEMKGRLDSDDNYFFDGAEAVNKSGVKLGKEAFVNADFESIASGLNG
DKSFNRLARDENGIFLLGDLFALSDSVPEGVGARYNSSKFKIESGSASDGASMLVALLII
LAALGLTLVIEKKM
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattattttggcttgtgctgtcgctttgcttgcggtggctggttcttttgcg
gataaaaagccgtggaatgaggtggcagctccggaaattactaaaatcgagcagaccgga
cctaacgaaatcaaggtctcttttaagagcaacacatcaaaagatgcagcagacaagggc
tatgtaagctataagtcagattctggtgcctctggaaaagaagcttacggacgaacccga
aaagaggcaaaaacagcaactttcaaccttcagaaaactggaacatacacattcatcgca
tacgcagaacgcaacggcgaaagcgaaaaacacgcttccgcaccggtgacattcaaatat
tcacttcctctgggaaaagccctgcttatggcaagaaacctgggcagcggaaaggtcctg
gtctcatggagccaggttcctgaggcagagggctacattctttcttacacagacgaaaac
ggtaagaaagtttcacttccaaagacaaaggaacttcaggcagaagtttcaattccggct
ggaactgtatcaagctttactgtaagcgctgtccgcggaaacgaatcattcccttctgac
acaatcaaaaagactgtccgagagcaggcagaacgggtctggaatttcactgaattcgga
acttctacaaatccaggcagaaacaatttccagcttcttgattccgacaacctcaaggtt
aagctcaattcatgtacattcgatcctgcgaccggaacaatcatcgacaagggcggaaaa
ttcgaaacattcttcgacggtatttccttctattacacagaattggatccgttcaaggaa
aacttcgagcttactgcaaccgtaacagttgactaccacaacccgactgctgacggtcag
gaaggattcggtcttcttgcaatcgaccgtctgggaattgacggagaatcaatggtcatc
gcctacaacaactcggcaggcgtaatttcacgaaaattcacaactcatgtaaacggcgtc
aaaaaggaaatcaaggacggactcggttcacgcttcgtttccggaatcactgattcaatc
attgaggaaggtgacgctgcaatcaaaaacaaatgttcaagcgtaagcaaggcattcagc
tacgaccaggcttctgacgcaatcaaaactggcgacgtataccgaatcaccctcaaaaaa
gacaacaccggctaccatgcaatctacaagagggcaatcgcatctgaggattcagtcgaa
gaattcctcatgtacgacacagagaacaaaaagcttacccagctcgaccctgagcacatc
tacgttggttttgccgtagcgcgaggatgtaacgcaacattcagcgacgtagaattcaag
gtaactgacccgaaaaatgatcctccggcccttgaagagccgcctgagcttgttcctctt
acaaccctcatcgactgccctgtaacatggtacaatcaggaatatcctttcgtattcaat
gcaaactcaaacggaacaattcacgtcgaggacacaaaaggccgcgtcctcatcgcttct
ggaaaagttgaggctaaaaaagacttcaagaaagtcatcaaaatcaacaagggcaacaac
gacctcatcgtaacctttgacccggaagacggatttaagccggagccaaaacaggtcatc
gcccagttcaacaaaaatctcgacgtaaacgcctacgaagaaaactacaatcctgttact
tactctcacacagtaatttcaatgactttctcaggcaaatatctttacgtttcaaaagaa
ggctcggtcttcggcaagggaacaaaagatgatcctctcgatttgctttctgcaattcag
tacgttaaaccgggtcagacaatcctccttgctcctggaaaatactatccttcttcaagc
ctctggattgaacgcggaaacaacggtagtgaaacagaacgcaaggtcctcatgtcagaa
gatccggcaaagcgcgcaatcatcgacttctcaagcgcaaaaaccggaacaactgccttc
aaccttttcggaaactactggacaatccagaacatcgacatcactggaactccggacgac
tgcaaggcccttcagattgccggaaactacaacagaattatcatggttgacacatatctg
aacggtgacaccggaatccagatttcaggacgggcttcagaaccagcagaaaaatggcct
agctacaacctcgtttacggctgtgaatcattcggaaactgcgaccctgcccagaacaat
gcagacggctttgcatcaaaacttacttcaggcgaaggaaacgtattccgaaactgcgtg
gctcaccacaacgttgacgacggctgggacttgtacgcaaagattgagacaggcccgatc
ggagccgtaatcatcgacaactgtatcgcatacaacaacggacgcaagattgacaacaca
ggcaagggcgacggaaacggattcaagctcggcggcgacggaattgccgtaaagcacatc
atccgcaactcaatttcattcaacaacgacttgaacggaatcacgactaactcaaacccg
gccctgattgtcgaaaactgtacggcttacggaaacaaagtgtcaaacctcaacctttac
ggaaagggaaacgctgaccagtatccgagaacagttcaggtaaagggcatgctttctgca
gccggacttggacgtgaccgcttcgacgaaagcaaggaccctgaaatgaagggccgcctc
gacagcgatgacaactacttcttcgacggagcagaagccgtaaacaagagcggcgtaaaa
ctcggcaaggaagcctttgtaaacgcagattttgaaagcatcgcaagcggcctcaatggg
gacaagtctttcaaccgccttgcacgcgatgaaaacggcatattcctgctcggagacctc
ttcgcactttcggacagcgttcctgaaggagtcggagcaagatacaacagcagcaagttc
aagattgaatcaggctcagcttcagacggagcttcaatgctcgttgcattgctgattatc
cttgcagccctcggactgacgcttgtgattgaaaagaaaatgtaa
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