Treponema ruminis: DYE50_02605
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Entry
DYE50_02605 CDS
T07166
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tri
Treponema ruminis
Pathway
tri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DYE50_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tri03021
]
DYE50_02605
03400 DNA repair and recombination proteins [BR:
tri03400
]
DYE50_02605
Enzymes [BR:
tri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DYE50_02605
Transcription machinery [BR:
tri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DYE50_02605
DNA repair and recombination proteins [BR:
tri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DYE50_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
QSI01470
LinkDB
All DBs
Position
548936..549997
Genome browser
AA seq
353 aa
AA seq
DB search
MARKNLLKGFKKPKTVQFDPLETNPNYGKFTAYPFETGFGTTIGNTLRRVLLSSIQGYAI
SSVRITSYDPDGVPHVISSEFETIPNVSEDTLEILNSLKLMRLRLPEDVEQDTILFDFKG
PGTVKTDDFAKEGQLEVLTKDVPVFTMMDGAHVEIEIQVDLGRGYVPAEVNEHYIEVVGT
IPMDAIFTPVTKVKYMIEPCRVGQRNDYDKLVLEVWTDGTIAPEDALAEAAKIAKDHFSV
FVNFNDSDISGGDDFDEGDEKIRQLLNTPVEELELSVRSSNCLKNANIRTIGELTRKTED
DIAKTRNFGKKSLTEIKEKLLEWNLNLGMTDYSHLKNSVNLTKPAQKEESNEK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaaaaacttgctgaaaggttttaaaaaaccaaaaaccgttcagttcgatcct
cttgaaacaaacccgaattacggaaagtttacagcttatccttttgagacaggatttggt
actacaattggaaatacactccgacgtgtacttctttcttctattcagggatacgcaatt
tcctcagtaagaattacatcttacgatcctgacggtgttccgcatgttatttcaagtgaa
tttgaaacaattcctaacgtttcagaagacactttggaaatcttgaacagtctcaagctt
atgcgtttgagattgccggaagacgttgagcaggatacaatcctttttgatttcaaaggt
cctggcacagtcaagactgatgacttcgcaaaagaaggacagcttgaagttcttacaaaa
gatgtaccagtcttcacaatgatggacggtgctcatgtcgaaattgagattcaggttgat
ttgggaagaggttatgtccctgcagaagtaaacgagcattatatcgaagttgttggtaca
attccgatggatgcaatctttacacctgtaacaaaagtaaaatacatgatcgaaccttgc
cgagtaggccagcgtaacgattatgacaagcttgttcttgaagtatggactgatggaact
atagctccagaagatgcattggctgaagctgcaaaaattgcaaaagatcacttctcagtt
tttgtaaacttcaatgacagtgatatttctggtggtgatgattttgatgaaggcgatgaa
aagattcgtcagttgcttaacactcctgtagaggagcttgagctttcagttcgctcatca
aattgtctcaaaaatgcgaatattcgcacaatcggcgaattgactagaaaaactgaagat
gatattgccaagacacgaaactttggtaaaaaatcacttacagaaatcaaggaaaagctc
ctcgaatggaacttgaacttgggaatgactgattacagccatttgaaaaactcagtcaat
ttgacaaagccagcacaaaaggaagaatccaatgagaaataa
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