Treponema ruminis: DYE50_02775
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Entry
DYE50_02775 CDS
T07166
Symbol
trmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
tri
Treponema ruminis
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tri03016
]
DYE50_02775 (trmE)
Transfer RNA biogenesis [BR:
tri03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DYE50_02775 (trmE)
Prokaryotic type
Methyltransferases
DYE50_02775 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
Dynamin_N
FeoB_N
Ras
RsgA_GTPase
Roc
AIG1
MMR_HSR1_Xtn
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QSI01504
LinkDB
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Position
626855..628234
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AA seq
459 aa
AA seq
DB search
MTNLKYTPEEPIAAIATALAPAALGIVRCSGKNSIELLSKIFSRPKALLEAAGNTIVYGW
IFDGKSKIDEVLLSVFRAPKSFTGEDMVEISCHGGVHVVQAVYNLLLNSGFRAAEKGEFT
FRAYINGKADLTKAEAVREIIDSKTDVSQSRAAGRLAGNLYETIDGVKKHIVDTLAAIEV
EIEYPEDEETIADSFDSTELKKAESVLQELAASWKSEKIYQDGARVVLCGRTNAGKSSLF
NALLKEDRAIVSDIEGTTRDFIESWIDFAGIPARLFDTAGLRETSDVIEAVGVERTRDLS
EDADLILYLVDSKSGLNDEDKSFIQAHISRTDSKIPLILVWNKCDLSENTDSSFDVPQVR
ISAKKGIGLGSLSESVRSALSAGGSSERNSTGLGSERQKISVEKALESVRHALSLTEDYA
LDAVVQDLEDSLDALGEVTGDVTPDDVLGSIFSHFCVGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatttaaaatacacacccgaagaaccgattgcggccattgcgacagcccttgcg
cccgcagcccttggaatcgtccgttgttcgggaaaaaacagtatcgaacttctctcaaaa
atcttctcaaggccaaaagccctgcttgaagcagccggaaatacaatcgtctacggctgg
atttttgacggaaagagcaaaatcgatgaagttttgctttctgttttccgtgctcccaag
tcttttaccggcgaggacatggttgaaatttcctgccacggtggcgttcatgtcgtgcag
gctgtttataatcttctattaaatagtggttttcgcgcggctgagaagggcgaatttact
ttccgagcctacatcaacggcaaggctgatttgactaaggccgaggctgtccgagaaatc
atcgactcaaaaactgatgtcagccagagccgggctgccggtcgactggccggaaacctt
tacgagacgattgacggcgttaaaaagcacattgttgatactcttgcggctattgaagtt
gagattgaatatccagaggacgaagagactattgcagattctttcgactctaccgagctt
aaaaaagccgagtccgtcttacaggaacttgccgcatcctggaaaagcgagaaaatctat
caggatggagccagagttgtcctctgcggccggacaaatgccggaaaatcttctttattt
aacgcgcttctcaaggaagaccgggcaattgtcagcgacatcgagggaactacccgagac
tttatcgaaagctggattgactttgcaggaattccggctcgtctttttgacacggcgggc
cttcgcgagactagcgatgtgattgaggccgtcggcgttgagcgcacccgtgatttgagt
gaagacgctgatttgattctctatcttgttgactcaaaatccggcctgaatgatgaggat
aaatctttcattcaggctcatatttcccgaactgactcaaaaattccccttattcttgtc
tggaataaatgtgatttgtcagaaaatactgattcttcattcgatgtgcctcaggtccgc
atttctgccaaaaaaggaattgggcttggaagcttgagcgagtctgtccgttctgccctt
tctgcgggcggaagttcagagaggaacagcacgggacttggctcagagaggcagaaaatt
tcagtggaaaaggctttggagagcgtacgccatgcactttcgctcaccgaagattatgct
ttggacgcggttgtccaggatttggaggattctttggacgcgcttggagaggtcaccggt
gatgttacaccagatgatgttcttggttcaattttctctcacttctgtgttggaaaataa
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