Treponema ruminis: DYE50_03535
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Entry
DYE50_03535 CDS
T07166
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
tri
Treponema ruminis
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tri03021
]
DYE50_03535
03009 Ribosome biogenesis [BR:
tri03009
]
DYE50_03535
Transcription machinery [BR:
tri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DYE50_03535
Ribosome biogenesis [BR:
tri03009
]
Prokaryotic type
rRNA transcription factors
DYE50_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
Zn_ribbon_3
KH_NusA_C
UPF0547
Zn_Ribbon_1
S1
DZR
Zn_ribbon_LysW
KH_2
HypA
Zn_Ribbon_TF
Zn_ribbon_15
DZR_2
DUF7130
DUF7129
Zn_ribbon_6
HHH_5
GFA
Zn_ribbon_DUF2089
DUF2321
Malt_amylase_C
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
QSI01651
LinkDB
All DBs
Position
808203..809669
Genome browser
AA seq
488 aa
AA seq
DB search
MSEMADAIRELTQEKGFSLDSVKQTIENTLRAAYKRTFGTADNCIVTFADDMSDVTVASR
KTIVDGVYDPVTEIELEDALKLSPECELGDEIDIVVDPKTFDRSAVSVGKQETHKGLNES
FKDKLYNEYKDKVGEIIIGYFQREYNGNIYVDLGKVEGVLPKKYQSPREVYNKNDRIKAF
IVDLKRISSGLQLVLSRSDPKFVQSILELEVPEIQDKTVEIKKIVRDAGYRTKIAVSTTK
EDVDPVGSCVGPKGMRIQNVIRELEGEKIDVLRYSDDPVVFIKNALSPAEVNRVVILDDE
KKTALAIVNDEQFSVAIGKNGQNVRLANRLCDWSIDVKTEEQAAEMDLTEITTRRAQELF
TNTAAPAEPEEISVIADLPGVNQEVAAKLKEAGYEDIEKFALAYENGELNGLESVTAEEL
EEVSKIVHNTVEFVEEEEEETSEVAPTEENTAEEEEEYFCPECGAKITLDMTHCPSCGVE
FEFEEDEE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatggcagatgcaatccgtgaactgactcaggaaaaaggtttttcattggat
tcagtcaaacagactattgagaacactttgcgtgcagcttacaagcgtactttcggtact
gctgataactgtatcgttactttcgctgatgatatgtcagatgttaccgtcgcttctcga
aaaactatcgttgacggcgtgtatgacccggttaccgaaattgagcttgaggacgctctt
aaactttctccagagtgtgagcttggtgatgaaattgatatcgttgtggatccaaaaaca
tttgaccgttcagcagtttctgtcggaaagcaggaaacacataagggcttgaacgagtca
ttcaaagataagctttataacgaatacaaggataaggtcggtgaaatcatcatcggttat
ttccagcgcgagtacaacggtaacatctatgttgaccttggaaaggttgagggcgttttg
ccaaagaaatatcagtctccgcgtgaagtttacaacaaaaacgaccgaattaaggctttc
atcgttgacttgaagagaatttcatctggtttgcagcttgtattgagccgttcagatccg
aaattcgttcagtctatccttgagcttgaagttcctgagattcaggacaaaacagtcgaa
atcaaaaaaattgtccgcgatgcaggctaccgcacaaagattgccgtttcaactacaaaa
gaggatgttgatccggtcggctcatgtgtcggtccaaagggtatgcgaatccagaatgtt
atccgtgagcttgaaggcgagaagattgatgtcctccgctattcagacgacccggttgta
ttcatcaagaatgccctttctccagctgaggttaaccgcgtagttatcctcgatgacgag
aaaaagacagcgcttgcaatcgttaacgacgagcagttctcagttgcaatcggtaaaaac
ggtcagaacgtccgccttgcaaaccgcttgtgtgactggagcattgacgttaaaacagaa
gagcaggcagcagagatggatctcacagagattacaacccgccgtgctcaggaattgttc
acaaatacagccgctcctgctgagccagaagaaatttctgtcatcgcagaccttccggga
gtcaatcaggaagttgctgccaagctcaaggaagcaggctatgaggatattgagaaattc
gcccttgcatatgaaaatggtgagttgaacggtcttgaaagtgttacagcagaagagctt
gaggaagtaagcaagattgttcataacacggtagaatttgtcgaagaagaggaagaagaa
acttctgaggttgctccaacagaagaaaatactgccgaagaggaagaagaatacttctgc
ccagagtgcggtgcaaaaatcacgcttgacatgacacattgtccatcatgtggcgttgaa
ttcgaatttgaagaggacgaagagtaa
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