Treponema ruminis: DYE50_03665
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Entry
DYE50_03665 CDS
T07166
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tri
Treponema ruminis
Pathway
tri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYE50_03665 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tri03019
]
DYE50_03665 (pnp)
03016 Transfer RNA biogenesis [BR:
tri03016
]
DYE50_03665 (pnp)
Enzymes [BR:
tri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DYE50_03665 (pnp)
Messenger RNA biogenesis [BR:
tri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DYE50_03665 (pnp)
Transfer RNA biogenesis [BR:
tri03016
]
Prokaryotic type
tRNA degradation factors
DYE50_03665 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
Potyvirid-P3
KH_2
Motif
Other DBs
NCBI-ProteinID:
QSI01677
LinkDB
All DBs
Position
847371..849476
Genome browser
AA seq
701 aa
AA seq
DB search
MSVERVTYKLGDSELILETGKIGKQANGCVYAQYAGAAIVATVCASSEVKEGLDFVPVTV
EYNEKYYAAGKIPGGFIKREGRPKDKEILVSRLIDRPMRPLFEVSFGREIQIVPTCVSSD
GINPPDILAVIASSAAVSISDIPFHGPVAAARVAYINGEYVINPTFQQQEKAELEIVVAG
TKDGFTMVEGGANEVSEDIMLGALEKAQGFITAMCELQEQLVAKCGKEKLPLAPLNVELE
NKDAIIAEATPLLEKACFQDGKMNRGKAISEVKKQVVANHAEQLADEIQKKLFDQCFDDI
QYNLLRKSILDKGLRIDGRKCDEIRPITCEVNVLPRPHGSALFTRGETQSLAVTTLGTAL
DAQVLDDIDGERSENFILHYNFPPYSVGETGRLTTGRREIGHGNLARRSLAPMIPPMSEF
PYTIRVVSEIMESNGSSSQASTCGGCLSLLAAGVPMKKMVAGIAMGLITEPEGDNPYGRY
KILSDILGEEDHLGDMDFKVAGTKDGITGFQMDIKIAGVTTEIMKNALAQAKAGRLHILS
IMEKCIDKPQPISPFAPKILTMKIAPDKIGALIGPGGKNIKALCAQYGVTINTEDDGTVQ
IYGKTGKSAEEAKIAVKGICEDPEVGTIYNGTVKRIMEFGAFVEILPGKEGLCHISKLSR
GRVEKVTDVLKEGQQIPVKLLEVDKQGRLNLSYIDAIEAKK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagaaagagtaacctacaaacttggagattccgaacttatccttgagactggt
aaaatcggtaagcaggcaaatggttgtgtatatgcacagtatgcaggtgcagcaatcgtt
gctacagtttgtgcttcatcagaagtaaaagagggattggacttcgttcctgttacagtt
gagtacaacgaaaaatattatgcagctggtaaaattcctggcggattcatcaagcgtgaa
ggacgcccaaaggacaaggaaatccttgtttcacgtcttatcgaccgcccgatgcgcccg
ctttttgaagtaagcttcggccgcgaaattcagattgttccaacatgcgtttcatctgac
ggaatcaacccgccggacattcttgcagttatcgcttcttctgctgcagtttcaatttct
gacattccgttccacggccctgtcgcagccgctcgtgttgcttacatcaacggtgaatat
gtcatcaacccgacattccagcagcaggaaaaggcagagcttgaaatcgttgttgccggt
acaaaagacggcttcacaatggtagaaggcggtgcaaacgaagtttctgaagacatcatg
ctcggcgccctcgaaaaggcacagggctttatcacagcaatgtgtgagcttcaggaacag
cttgttgcaaaatgcggcaaagaaaagcttcctctcgctccactcaatgttgagcttgag
aacaaggatgccatcatcgcagaagcaacaccacttttggaaaaagcctgcttccaggac
ggcaaaatgaaccgcggcaaggcaatttctgaggttaaaaagcaggttgttgcaaatcac
gcagagcagctcgctgacgaaatccagaaaaagctctttgaccagtgcttcgatgacatt
cagtacaaccttctccgaaaatcaattttggacaagggcttgcgaatcgacggacgcaaa
tgcgacgaaatccgcccaatcacttgtgaagtcaacgttctcccacgtcctcacggctcg
gctttgttcacacgcggtgaaacacagtctctcgctgtaacaactttgggaacagcactc
gacgcacaggttctcgacgatatcgacggagagagaagcgaaaacttcatcctccactac
aacttcccgccatattcagttggtgagacaggccgcctgacaactggccgccgcgaaatc
ggtcacggaaacttggctcgccgttctttggccccaatgattcctccaatgtcagaattc
ccatacacaatccgtgtagtttcagagattatggaatcaaacggctcatcttcacaggct
tcaacttgtggtgggtgtctctcattgctggctgctggcgttccaatgaaaaagatggtt
gccggtatcgcaatgggccttatcacagagccggaaggcgacaatccatacggacgctac
aagattctttctgatatcctcggtgaagaagatcacttgggcgacatggacttcaaggtt
gccggtacaaaagacggtatcactggcttccagatggatatcaagattgccggcgttaca
acagaaatcatgaagaacgctttggcacaggcaaaagctggccgcctgcacatcctttca
atcatggagaagtgcatcgacaagcctcagccaatcagcccgttcgctccgaaaatcctc
acaatgaagattgctccggacaagatcggcgccctcatcggaccaggcggaaagaacatc
aaggctctctgcgctcagtacggtgttacaatcaacacagaagacgacggaacagttcag
atttacggcaaaacaggcaaatcagccgaagaagcaaaaatcgccgttaaaggcatctgc
gaagacccggaagtcggcacaatttacaacggaactgttaaacgaatcatggaattcggt
gcgttcgttgagattttgccaggcaaagaaggcttgtgtcacatttccaaactttcacgc
ggccgcgtagagaaggtaactgacgttctcaaggaaggacagcagattcctgtaaaactt
ctcgaagttgacaagcagggaagattgaatctttcttacatcgacgcaatcgaagcaaag
aaataa
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