Treponema ruminis: DYE50_04110
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Entry
DYE50_04110 CDS
T07166
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
tri
Treponema ruminis
Pathway
tri00920
Sulfur metabolism
tri01100
Metabolic pathways
tri01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
DYE50_04110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tri03400
]
DYE50_04110
Enzymes [BR:
tri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
DYE50_04110
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
DYE50_04110
DNA repair and recombination proteins [BR:
tri03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
DYE50_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Spectrin_5
Motif
Other DBs
NCBI-ProteinID:
QSI01759
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All DBs
Position
complement(940093..941073)
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AA seq
326 aa
AA seq
DB search
MQIISDEKINEFKNFLGSHDFFYVISHKDPDGDAIFSSLGMKDILEAKGLSYQLLSAGPF
KRPEIRSKAKFFSNQMIFLSEPERKKAGLIILDCSEMERLGEIDGDLKNLDTFTIDHHKT
AAASENCIIDSTSPATAALIQQIYEKLLGKLPKQTAENLFFGLSTDTGYFRFLNTDSAEV
FRQAARLVESGADPRKTYDEMTGGKPYSTRKLLGIMLDRVERRYNNKLAVTYETMEDTKK
WGQEGRDSDALYSLLLSVDGVEAVLFVRQDTELTCTCGFRSRDKIDVSAIAAKFGGGGHK
NAAGLSIDGKIPDVLEKICAEFKKVM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcagattatttctgatgaaaaaatcaatgaattcaaaaattttcttggcagtcatgat
tttttttatgtaatttcacacaaagaccctgacggagacgcaattttcagttccctcggc
atgaaggatattctcgaagcaaaaggactttcctaccagcttctttcggcaggtcctttc
aaaagaccggaaatccgcagtaaggcaaaattcttctcaaaccagatgatttttctttct
gagcctgagcgtaaaaaggcaggactcataatcctcgactgttctgaaatggaacgcctt
ggagaaattgacggcgacctcaaaaatctggacacctttacaatcgatcaccacaaaacg
gctgccgcaagtgaaaactgcatcatcgattccacttctcctgccacagcggcactcatc
cagcagatttacgaaaaacttctcggaaagctccccaagcagacggctgaaaatcttttc
ttcggcctttctaccgatacaggctatttccgcttcttaaacacagactcagcagaagtc
ttcagacaggcggcccggctggtagaatccggagcagatccaagaaaaacttacgatgaa
atgacaggcggcaaaccctactctacccgcaagctcctcggaatcatgctcgaccgcgtt
gaaagacgctacaacaacaagcttgcagtcacttacgaaacaatggaagatacaaaaaaa
tggggtcaggaaggccgtgattcagacgcactctactccctcctgctttcagttgacgga
gttgaggcagtattattcgtccgccaggatacagaactcacctgcacctgcggcttccgt
tcccgggataaaatcgacgtaagcgcaatcgcagcgaaattcggcggcggcggccacaaa
aatgcagccggtctcagcatcgacggaaaaatcccagacgtacttgagaaaatctgcgcg
gaattcaaaaaagtaatgtaa
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