KEGG   Treponema ruminis: DYE50_06490
Entry
DYE50_06490       CDS       T07166                                 
Name
(GenBank) type III restriction endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
tri  Treponema ruminis
Brite
KEGG Orthology (KO) [BR:tri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tri02048]
    DYE50_06490
Enzymes [BR:tri01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     DYE50_06490
Prokaryotic defense system [BR:tri02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   DYE50_06490
SSDB
Motif
Pfam: HI_1054_C ResIII HI_1054_N HI_1054 DEAD SWI2_SNF2 SLFN-g3_helicase DUF562 PIN_10
Other DBs
NCBI-ProteinID: QSI02219
LinkDB
Position
1438935..1441703
AA seq 922 aa
MELEEQKSLYEQYENVKKSGLIPIPDVPDYIKNNLKYEFFEWQKEAFENFILNEKAREAK
KINTPNHLMFNMATGTGKTLLMAALILYYYHEKGINKFIFFVNQNAIVGKTQSNFLEVNH
NKYLFAENIEIDGIPIKIKEVEQFSNFSDDIQIKFTTIHKLHNSVYNEKENEVLLSDLMK
KDIVLIADEAHHLNSSTSKGNDFEDLSFIGELKDGAKDEDVEKSWEKTVIYHLLDKEYKV
ENNQNVLLEFTATIPKEEAIQAKYKPLTIYKFDLPDFVRAGYTKEIGLIPSDGNKKQRIL
QALLFNWYRSQIALDYNIPNFKPVILFRSKLIDASKKDFEEFNQLIKNLKPEDFSFLNNL
KVDESQSQSYQNKLIHITKINKYIHDKSISFIDIIAFLQREFDERNCLITNSKTNTTQKE
KTDSETDRLLNSLEDPRNHIRAIFTVQRLTEGWDVLNLYDIVRLYEGRDEGHDKKSGKRI
SGSSTTSEVQLIGRGIRYYPFDYNNLQKNKRKFDNNTEHELHCLEEFNFHSDADERYIDE
LKRELRNKGLVNDKRIEKKFSFKKEFEQYVNGMMLFANEQIENPERKLTTLDDILNSSKA
FVYEVKDSGLYSKLIQLHFEKNVDDEVLSVAETPEKHTLYKKFADFLEEKHIVFKALHIL
NLRTNSYFRFETLKEKQDVKSIDEFLQKIKEKEIQIVCDSRVTFESGLSNEEKLNCLVGF
FEWLGAELETYDVPYKGSEFTLKPLIECFPEEKRNQSRMINMDNEDDKNKNLALEEKLQK
LDWYANEGFWGTSEERALISYIENNLGNLNQNYSEIKLLRNEEIFKIYDFDHGQGFEPDF
ILFLKSKETAHFLQVFIEPKGEQLFEKDAWKNTFLNQIAEKYGVEKIVISEFEQYRLVAL
PFFNSNHIATKNQFEAKFQKLL
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggaactagaagaacaaaagtctctttatgaacagtatgagaatgtaaagaaatctggt
cttataccgattcctgatgttcctgactatataaagaataatcttaaatatgagttcttt
gaatggcagaaagaagcctttgagaactttattttaaatgaaaaagctagagaagcaaaa
aaaattaacactccaaatcatttgatgtttaatatggctacgggaacgggaaaaacatta
ttaatggccgctcttattctgtattattatcatgagaagggtataaacaaatttattttt
tttgttaatcaaaatgcaattgtcggtaagacacaaagtaattttttggaagtaaaccat
aataaatatttgtttgctgaaaatatagaaattgatggtattcctataaaaataaaagag
gttgagcagttttctaatttttctgatgatattcaaattaaatttacaacaattcataag
cttcataattcagtctacaacgagaaagaaaatgaagtcttattaagtgacttaatgaaa
aaagatattgtattgattgctgatgaagcgcatcatttaaactcatctacttcaaaagga
aatgatttcgaagatttatcatttattggagaattaaaagatggtgcaaaagatgaggat
gttgaaaaatcatgggaaaaaactgttatttatcatcttctggataaagaatacaaagtt
gaaaataatcaaaacgttttattagaatttactgccacaattcctaaagaagaagctata
caagcaaaatataaaccattaacgatttataaatttgatcttcctgactttgtacgtgct
ggctacacaaaagagataggtttgattccttcggatggaaataaaaagcaaagaatatta
caagcgcttttatttaattggtatagaagtcaaattgcattggattataatattccaaat
tttaaacccgtaatacttttccgaagtaaacttattgatgcttctaaaaaggactttgag
gagtttaatcaattaataaagaatttaaaaccagaagatttttctttcttaaataatcta
aaagttgatgaatctcagagtcaaagttatcaaaataaattgattcatatcactaagata
aataaatatattcatgataaaagcatttcattcattgatataattgctttcttacaaaga
gaatttgatgaaagaaattgcttgattactaactcaaaaacaaatactactcagaaagaa
aaaacagattcggaaacagataggttattaaatagcttggaagatcctagaaatcatata
agggcaatatttactgtccaaagattgacagagggatgggatgttctaaacctatatgat
attgttcgtctatatgaaggtcgtgatgaaggacatgataagaaatccggaaaaagaatt
tccggttcttcaacaacttcagaggttcagttaataggtcgaggtattcgttattatcct
tttgattataataatttacaaaaaaataagagaaagtttgataataatacagagcatgaa
ttgcactgtcttgaagaatttaatttccatagtgatgcagatgaacgttacattgatgaa
ttaaagcgtgaattaagaaataaaggtctggtaaatgataagagaatcgaaaaaaaattc
tcattcaagaaagagtttgagcaatatgtcaatggaatgatgttatttgctaatgaacaa
atagaaaatccagaaagaaaacttacaacattggatgatatattaaactcttcaaaagct
tttgtatatgaagtaaaagattcgggtttatatagcaagttaattcaacttcattttgag
aaaaatgttgatgatgaagttcttagtgttgctgagacaccagaaaaacatactttatat
aaaaagtttgctgatttcctagaagaaaagcatattgtttttaaagctctacatattttg
aatttaagaaccaattcatatttcagatttgagactcttaaagaaaaacaagacgtaaaa
tcaattgatgaattcttacaaaaaataaaagaaaaagaaattcaaatagtatgcgattcg
cgggtgacctttgagagtggtttatccaatgaagagaaactgaattgtttggttggcttc
tttgagtggttgggtgcagaactagaaacatatgatgttccatataaaggttcagaattt
actctaaagcctttaatagaatgttttccagaagaaaaaagaaatcaatctcgaatgata
aatatggataatgaggatgataaaaataaaaatcttgcacttgaagaaaaattacaaaaa
ttggattggtatgcaaatgaaggtttctggggaacatctgaggaacgagctttaatttca
tacatagaaaacaatttaggaaatttaaatcaaaattattcagaaattaagcttctgaga
aatgaggaaatatttaaaatctatgactttgatcatggacaaggatttgagccagatttt
atattgttcctaaaatcaaaagagactgctcatttcttacaagtatttattgaacctaag
ggtgaacaattatttgaaaaggatgcatggaaaaatacattcttaaatcagattgcagag
aaatatggtgttgaaaaaattgtaatctctgaatttgaacaatataggcttgttgcatta
ccattttttaattcaaatcatattgcaacgaaaaaccaatttgaagcaaaatttcagaaa
ttgttgtaa

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