Treponema ruminis: DYE50_07040
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Entry
DYE50_07040 CDS
T07166
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
tri
Treponema ruminis
Pathway
tri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DYE50_07040 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tri03400
]
DYE50_07040 (xseB)
Enzymes [BR:
tri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DYE50_07040 (xseB)
DNA repair and recombination proteins [BR:
tri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DYE50_07040 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
Laminin_I
Dynamitin
DUF6730
DUF4200
Motif
Other DBs
NCBI-ProteinID:
QSI02320
LinkDB
All DBs
Position
1552841..1553143
Genome browser
AA seq
100 aa
AA seq
DB search
MKSFEENLSRLEELTANIRKQDISLEDALANFEEGIKLAKTLEKDIEKIEGKIQILMNQP
VKADPASPLPQINIEPQLDLFSGADSMTGSAGAPTEGLRQ
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatttgaagaaaacctttcccgattggaagaactcacagcaaatatccgcaag
caggacatttcccttgaagatgcccttgcaaattttgaggaaggaatcaaactcgcaaaa
actctcgaaaaagacatagaaaaaatcgaaggcaaaatccagattctaatgaatcagccg
gtaaaggcagacccggcctcaccccttccccagataaacatcgagccccagcttgacctc
ttttccggggcagactcaatgaccggaagtgccggtgctccaaccgaaggactccgccag
taa
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