Treponema ruminis: DYE50_07245
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Entry
DYE50_07245 CDS
T07166
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
tri
Treponema ruminis
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tri03009
]
DYE50_07245
Enzymes [BR:
tri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DYE50_07245
Ribosome biogenesis [BR:
tri03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DYE50_07245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
EAD10
EFG_IV
Motif
Other DBs
NCBI-ProteinID:
QSI02361
LinkDB
All DBs
Position
1628047..1629015
Genome browser
AA seq
322 aa
AA seq
DB search
MDFTHFTAGKDDSDRRLDRILRRFLSEENLSSIYKLLRKGLVKVNGKKADGNFRISEGDD
IQIADFLLSSASKNENPGAEKTSPLSKDIIIFKNESILILNKPYDIPVQPSSSSRGNSLA
EIVQKDYEISHKKDSLSFRTGPLHRLDRKTTGLIAFSQNLEGAKWFSEKIKSHEIQKIYL
AVLQGKLMEKQVWEDQIEKLENSNEQAGSGNFHTVSVNSSGEGKFAHTEVTPLSQGIFCG
KEVTIVRVLITTGRTHQIRSQSAYHGFPLLGDTAYGAVKIDSKRFGQDFFLHASELYFPK
DNPLSLPEKITSPLPEFFPTFN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacgcacttcacggcaggaaaagacgactcggaccgcaggctggacaggatt
ttgcgaagatttttgagcgaggaaaatctttcttctatatataaacttcttcgcaaaggt
cttgtcaaagtcaacggtaaaaaagcagacggcaatttccgcataagtgaaggcgatgac
attcagattgcagactttctgctctcatcagcttcaaagaatgaaaatccgggggcagaa
aaaacctctcctctttcaaaagacataatcatcttcaaaaacgagtcgattttaatcctc
aataagccctacgacattccggttcagccctcatcctcatcaaggggaaattcgctggca
gaaatcgtccaaaaagactacgaaatcagccacaaaaaggactcgctctcattcaggaca
ggccccctccaccgcctggaccgaaaaaccacaggtctgattgccttttcccagaatctt
gagggggcaaaatggttcagcgagaaaatcaagagccatgaaattcagaaaatctatctt
gcagtcctccagggaaagcttatggaaaagcaggtttgggaagatcagatagaaaaactg
gaaaacagcaatgaacaggctggaagcggcaattttcatacggtttcggttaattcttcc
ggcgagggaaaatttgcccatacggaagttacgcccctttctcaggggattttttgcggc
aaggaagttacgattgtccgcgttctgattacgacaggccgcacccaccagatccgctcc
cagtctgcctatcacggcttccctcttttgggggacacggcttacggagcagtcaaaatt
gactcaaaacgcttcggacaggatttttttcttcatgcctcagaactttactttccaaaa
gacaatcccctgtccctgccggaaaagattacgtcgcctctgccagaattttttcctact
tttaattga
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