Treponema ruminis: DYE50_07940
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Entry
DYE50_07940 CDS
T07166
Name
(GenBank) hypothetical protein
Organism
tri
Treponema ruminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SPT8
B-prop_COPA_B_2nd
Beta-prop_VPS8
DUF7165
Ge1_WD40
Hira
Motif
Other DBs
NCBI-ProteinID:
QSI02497
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Position
1792717..1794381
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AA seq
554 aa
AA seq
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MFFRRLSLLGFSALFFAAGSLSFSQEKINQNCIIAKSDEEVSSVAWSQDGKFFASAWNNS
IALWDSQSGEIIEIYREHTKPVKKVHFSKGGNRLLSLGQDNIVVMRDIVGSSGTIRAVGS
DLQPMNDAVFAGDNTSVILPGEGNVATLYFPLRLTNQFISKKLVKTASPVTSFDLSYDGS
TLLAGTEEGKAYILNINDGSGERIFSYYKDSGIPPRISGDGKFIFYQSDSQSLEVTSIDG
RESFTIRDSDFPVKTASFSSDGRLIAYAVKNGGIKIFSLQSKRTRHFFTLPLDQDMVTSL
AFSPNSQKMLAGTEKGLLLCWNISDNSQAVKNQQNPEDFINSQKNSGKKEAKPVTDIPLS
QTSEEADGYFSNQESQAEEKELDKAGAETQNLKNALELSFLVTSLNEDYYHTSFGLSAAW
KSYKKLPFFYGAGAEFSFAVPASDYPYTTSYEGIELNNPWLYRAHLYALTGLGHYIKEYN
LLFFCEGRLGLGGNMLFNNELKYRRTSKASYCILADALAGIQWKALTIYAGSEFDSSLGF
IVKAGAGVVIHLGK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcggcgtttaagccttttgggattttctgccctcttttttgcggcaggaagt
ctttccttttcacaagaaaaaatcaatcaaaactgtataattgcaaaatcagacgaagaa
gtttcatctgttgcatggagtcaggacggcaaattctttgcctcagcctggaataacagc
attgccctttgggacagccagtcgggcgaaatcatagaaatttaccgggagcacacaaag
cctgtaaaaaaagttcacttcagcaagggcggaaaccgtcttctctctctgggtcaggat
aatatcgttgtaatgcgggacattgtcggctcatcaggcacaatccgtgcagtcggcagc
gacttacagcccatgaatgacgctgtctttgcaggagacaacacttcagtcatcttgccg
ggcgagggcaacgttgcaaccctttactttcccctccgccttacaaatcagttcatatca
aaaaagcttgtcaaaacagcttctcctgtaacatcctttgacttatcctacgacggctca
acccttcttgcaggtactgaggaaggaaaggcttacattttaaatataaacgacggctca
ggagaaaggattttttcctattataaggattcaggaattcctccgcggatttctggggac
ggaaaattcattttttatcagtctgacagccagagccttgaagtcacttcaatagacgga
agagaatcttttacaatcagggattctgattttcctgtaaagaccgcctcattcagttca
gacggaagattaattgcctatgcggtaaaaaacggcggaataaagattttcagccttcag
tcaaaaagaacacgacactttttcacccttcctttggatcaggacatggtaacttcactc
gctttcagcccgaattcccagaaaatgcttgcgggcactgaaaaggggcttttactctgc
tggaatatttctgacaactctcaggctgtaaaaaatcagcagaatccggaagacttcatc
aattcacagaaaaattccggcaaaaaggaagcaaaacctgtaaccgatattcctttaagc
cagaccagcgaagaagcagacggatatttctcaaatcaggaaagtcaggcagaagagaag
gagctagataaagccggagcggagactcaaaaccttaagaatgccctggagctttctttt
ttagtcacctctttaaatgaggactactatcacacttctttcggactttccgccgcatgg
aagtcatacaaaaagcttcctttcttttacggagccggagcagagttttcttttgcagtt
ccggcaagtgattatccatatacaacaagctacgagggaatagaattaaacaatccctgg
ctctaccgtgcccatctttatgccctgacaggtttaggccactacataaaggaatacaat
cttcttttcttctgtgagggccggctgggcctgggcggaaacatgctcttcaacaacgaa
ttaaaatacaggcgcacgagtaaagcaagctactgcatccttgcagatgccctggcagga
atccaatggaaagccctgaccatatatgcgggaagtgaatttgattcaagtcttggattt
atagtaaaagccggtgccggagtagtaattcatttgggaaaataa
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