Treponema ruminis: DYE50_08120
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Entry
DYE50_08120 CDS
T07166
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tri
Treponema ruminis
Pathway
tri03420
Nucleotide excision repair
tri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DYE50_08120
03430 Mismatch repair
DYE50_08120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tri03400
]
DYE50_08120
Enzymes [BR:
tri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DYE50_08120
DNA repair and recombination proteins [BR:
tri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DYE50_08120
MMR (mismatch excision repair)
Other MMR factors
DYE50_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
YgfZ_barrel
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSI02533
LinkDB
All DBs
Position
1843833..1845923
Genome browser
AA seq
696 aa
AA seq
DB search
MTDLSDLKNELNPEQYEAVMTINGAILIIAGAGSGKTRVITFRIAHMLDAGVPQSAILAL
TFTNKAAREMSERIKDLTGKKLPLLTISTFHAFGVRILRQEISALGYRENFSIYDETDRN
ALIKETGRELAYSPDALDVYQVGILISDIKTGRKQWTIENEMYKDLYEGYQEGLKLYNAV
DFDDLITLPIKLFREHPEILAKYKERYKYIMVDEFQDTSHQQYEFMRLLADNNIAVVGDD
DQSIYSWRGADYQNIINFEKDFKDVKEIRLEQNYRSTGTILAAANGVIKHNTNRKDKELW
SGKGDGKPIEIYMPENETAEAAFITETIQGICVSEKRKYDDFCVLMRANTQSRAIEEAFL
AENIPYTMSGGTSFFQRKEIKDIISYLRVISNHDDDVNLLRIINTPRRGLGRATIEKLNE
IAKNLSCSLWEAINALLEVGDNEADLFMQGGTISEKSSHPDFDDESFSEGTKQNLKAFVD
IIEGNKSMLGGHGLAKKVRTMVENIRYFDYLIGENPKSEKAARFKMLNIESLIGSIERWE
NNPESGEPTLYNYLNRITLLSRDDLDDDENLGKVNLMTIHASKGLEFPVVFIAGTEEGLI
PHGRAVDEGGDAAVEEERRLFYVAITRARDKLLISSCRSRRRQNSSVESQPSRFLDEIPP
HLVEYHEPQKEVSADMAIDLLQQMKKKFTAPKVPGF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgacagacttatcagatcttaaaaacgagctgaaccccgagcagtatgaagccgtaatg
acaatcaacggcgccattctgattattgccggggccggcagcggaaagacacgcgtaatt
acattcagaattgctcacatgcttgatgcaggcgttcctcagagcgcgattctggccctc
acctttacaaacaaggctgcccgcgaaatgagcgagcgaatcaaggatttgacgggcaaa
aagctgcctcttctcacaatctccacattccacgctttcggtgtacgtattttaaggcag
gaaatctcagccctgggctaccgcgaaaatttctcaatctacgacgaaactgaccgcaat
gccttgattaaggaaacaggccgggaacttgcctactcccctgacgcactcgacgtctat
caggttggaattttgatttcagacatcaagactggccgcaagcagtggacaatcgaaaac
gaaatgtacaaggacctttatgaaggctatcaggaaggactcaagctctacaacgcggtt
gattttgacgatttgattaccctgccgattaagcttttccgagagcatccggaaatctta
gccaagtacaaggaacgctacaagtacatcatggtcgacgagttccaggacacaagccac
cagcagtacgagttcatgcgtcttcttgcagacaacaatatcgccgtcgttggtgacgat
gaccagtctatttactcatggcggggtgccgactatcagaacatcatcaattttgaaaaa
gacttcaaggacgtaaaggaaatccgtctggagcagaattaccgctcgacaggcactatt
cttgcggctgcaaacggcgtcatcaagcacaacaccaaccgcaaggacaaggaactctgg
agcggaaagggcgacggaaagccgattgaaatctacatgccggaaaacgaaactgcggaa
gcggctttcatcactgagacgattcagggaatctgtgtttcagaaaaacgcaagtacgat
gatttctgcgtcctcatgagggcaaacacccagtcacgcgcaatcgaagaagcctttctt
gcagaaaacattccctacaccatgagcggcggaacttcattcttccagcgaaaggaaatc
aaggacataatctcatacctgcgcgtaatctcaaaccacgacgatgacgtaaacctcttg
cgaatcataaacacaccgcgaaggggcctgggaagggctacaatcgaaaagctcaacgaa
atcgcaaagaacctttcctgctccctctgggaagcaatcaacgccctgcttgaagtgggc
gacaacgaggcagatttattcatgcagggaggaacgatttcagaaaaatcctctcatcca
gacttcgacgacgaatctttctctgagggaacaaaacagaacctcaaggcctttgttgac
ataattgaaggaaacaagtcgatgctgggcggccacggacttgcaaaaaaagtgcgcacg
atggtcgaaaacatccgttattttgattatctgattggcgaaaacccaaaatccgaaaag
gcagcccgctttaagatgctcaatatcgaaagcttgatcggctcaatcgagcgctgggaa
aacaacccggaatcaggcgagcctactctctacaactacctcaaccgaatcaccctttta
agccgtgacgaccttgacgatgacgaaaaccttggcaaagtcaacctgatgaccattcac
gcttcaaagggactggaattcccggtcgtattcattgcaggaaccgaagaaggcctgatt
cctcacggaagggccgttgatgagggcggagatgcggcggtcgaagaagaaaggcgtctt
ttctatgttgcaattaccagggcccgcgacaagctccttatttcaagctgccgcagccgt
cgcagacagaacagttctgtagaaagccagcccagccgctttttggacgaaattccgccg
cacctggtagaataccacgagccccagaaagaagtgagcgcagacatggcaatagacctg
ctccagcagatgaaaaagaaattcacagcgcccaaagttccgggattctaa
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