Treponema ruminis: DYE50_08295
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Entry
DYE50_08295 CDS
T07166
Name
(GenBank) hypothetical protein
Organism
tri
Treponema ruminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_7
Big_13
BNR
Y_Y_Y
CHB_HEX_C
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
QSI02564
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All DBs
Position
1882462..1887666
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AA seq
1734 aa
AA seq
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MKLSLKKSIFCLILGASCFSAFTLGKRDAEYRDVEEMDSWQETFDINEKKEGKYNIYVEA
KDKGGNTEIAGPYNLFIDPDSDYAISGITNPINNMRVPGNLNIVGTCVDDDGVAEVWLIL
DGGEPVKAEGKEFWSYYLDTNELAEGPHTIEVWGVDINGLSSQEKPKKKAFVTWNLDRRK
PVTTVTNHALGELVSGKISLKGDVTDGNGIKALYYSLDNGETYLETKISEYKTRDGATFD
VPIDTRIAKDGPAILWFKAVDKMGSIGVSSFLYFVDNTKPDVKIISPAEDEVCNGKFVVA
GFAKDKVGIHKLSWSFNGESEDFELIPGNPYWSKEINTIGMNVKSVDFTVTAVDTAGNVV
VLKKTIPINQESDKPVVTIQNPAEGSVLTGAADTLFVRGIVADDDGVASIEYSLDGAEPV
TLESQGVFCAQIENEALPAGLHKITVTATDIYGVRGNPVTATFTSMGPKISFATPKIGAE
DVTNGLLVHPESNPVYEVSATCPAGIASYSYKIESGFDDVFTSEEFTPKAPEKSISVKIP
LSNAPWGLVQITVSATDIYDRTVEKKSLINIKDLTYIHEDLLDAPLADKLIEGSDNSGVA
VDIVSINGEEYKAGMNVQIPYGKSTDPVVAVFNVETAEKSVSVNYLIEGDAEIGGDAQQT
GKAVLVDGQYVVKLENLPSRVTTLTVKAIAGKVASGSSKVTFCVVRPEPEKKSSWKTGEV
IWIPNENAVYSNDVNAYVIESDKEFTGYANISGPVSASVSSNAIELANEGKSIEIKALKD
GTYKNVAVTAKDGSGKSFTSPLVNLVVDTEAPKVEIVSPANHLWVQEGTSITANVTDANG
IAKVEYSTDGGESWAEMKASGSQYTANVGVKNRDDGLIGIDVRATDTTGKSTVRSVAIHK
DSTAPEVEVLLPGPDDIVNGDNLIAFKVKDNGRLDKVLYFPPAAKGTTPTPSDIPLAPLV
TTHIGTKDKPIDDLMSFKFVDAIGNTTEIKQWNFIIDNVSDLPIAEVHVPEENAVITRDF
EFSGVIYDDDGITKDELGEVIAGPKIFYKFDNGRYEALDQIGTSFIIPKKLTDFTDNEHS
ITIYAEDINGVKGPEFTRNFRISLEEPKGAVLTPPISETVKQTVKMTGIATDKNGIKAVY
ISVDNGNSFNEAVGNFGHEMTQCNWSYELDTRVIEDGTHVVFMKVVDWYGIEGLYSSLIN
IDNTPPKIELMLPLDDSKTTGMVFLSGQTIDNINLTKLFITIRSLDGKVVNSKLARTDLK
PDEIITQAMDITNLEDGFYNIELTGVDAAENITRVSRNIQLNKKAPKAKVDLLYPLNGEF
VQGVFNIYGTAVSETDIQSLTLFVDGNSVAETELSESGFFKYTLDQTMIQEGQHTIRVEA
YLADNSKIVSNTQYLNYSAVGPWITIDNFTYGDFAFDRPYIIGNSGYSYDEDEVVRANAK
GAPKELKEAVAAKVVDKVELSLDNGKTFKKLSSSGKWRFRVENEDIAEGYHFLLVRATMK
NGEIAVTRCIVQVDSTKPTIKLISPGAGGHYNQQMEFSGLAKDDIALKSLTLALRSGDKA
MYEIPGFIQGLYFDWQFWGATLFNVGAGLTFFDDNVKLQVQWGQFTQQQRDLFDQSNMRY
GGDNVLGVKLLANVYYMPFRYYFGPDWEWLSLNVAVGANFTRFNESGSGKAQILSAGLFQ
LEFPRVTFSRQKMFRTIAFYTEGQLWFIPTDVSSEEDIKSLVPQISFGLRVNVF
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagccttaagaaaagcattttttgtttgattttgggggctagctgtttttct
gcatttactcttggcaaacgcgatgcagaataccgtgatgtcgaagaaatggacagctgg
caggaaactttcgacataaatgaaaagaaagaaggaaagtacaatatctatgttgaagca
aaggataagggcggcaacacagaaatcgcaggtccttataacctcttcatcgatccggat
tctgactatgcaatttccggaattacaaaccctatcaacaacatgcgcgttcctggcaac
ctcaacattgtcggtacttgtgttgatgatgacggcgttgctgaagtctggcttattctt
gacggcggagagcctgtaaaagccgaaggtaaggaattctggtcatattatctcgatact
aatgaacttgcagaaggccctcatacaatcgaagtctggggcgttgatattaacggtctt
tcttctcaggaaaagccaaagaaaaaggctttcgtaacatggaaccttgaccgccgaaag
ccagtcacaactgtaacgaatcatgctcttggtgagctcgtttctggcaaaatcagtctc
aaaggtgatgtaaccgacggtaacggaatcaaagctctttactattctcttgataacggt
gagacatatctcgaaacaaaaatttctgagtacaaaactcgtgacggcgcaacatttgat
gttcctatcgatactcgaatcgcaaaagacggtcctgcaatcctctggttcaaggctgtt
gataaaatgggctctatcggtgtttcttcattcctttatttcgttgataacaccaaacca
gacgtaaaaatcatttcacctgctgaggacgaagtttgcaacggtaaattcgttgtagcc
ggtttcgcaaaagataaggtcggtatccacaagctctcttggtcattcaatggcgagagc
gaagatttcgagcttattcctggtaacccatactggagcaaggaaatcaatacaatcggc
atgaacgtcaaatctgttgatttcactgtaactgccgttgatactgccggtaacgttgtt
gtcctcaaaaagacaattccaatcaatcaggaatcagacaagccagtagtaacaattcag
aatcctgcagaaggctcagtcctcactggtgctgctgacactctctttgtccgcggtatc
gtagctgatgatgacggagttgcttctattgaatacagccttgacggcgcagaacctgta
actcttgagtctcagggcgtcttctgtgctcagattgaaaacgaggctcttcctgctggc
ctccacaaaatcactgtaactgcaactgatatttatggtgtacggggcaatcctgtaacg
gcaacattcacttcaatgggcccgaaaatcagcttcgcaactccaaaaatcggtgctgag
gatgtaacaaacggtcttctggttcacccggaatcaaatcctgtttatgaagtttcggca
acatgtcctgccggaatcgcttcttacagctataaaattgaatcaggtttcgatgacgtc
tttacttcagaagaattcactccaaaagcaccggaaaaatctatttccgtaaagattccg
ctttcaaacgctccttggggccttgttcagattacggtttctgcaactgatatttatgac
cgcactgttgagaaaaagtccctcatcaatatcaaggatttgacttacatccatgaggat
ttgcttgatgctcctctggctgacaaacttatcgaaggttcggacaattcaggcgttgcc
gttgacatcgtcagcattaacggcgaggaatacaaggccggcatgaacgtccagattcct
tatggcaagtcaactgaccctgtcgtagccgtattcaacgttgagactgctgaaaaatca
gtttctgtaaactacttgattgaaggtgatgccgaaatcggtggtgatgctcagcagaca
ggcaaagctgttctcgtagacggtcagtatgtcgtaaaacttgaaaatcttccttctcgc
gtaacaactttgactgtaaaggcaatagccggcaaagttgcttcgggcagcagcaaagtt
acattctgcgtagttcgcccggagccagagaagaagagcagctggaagactggtgaagta
atctggattccaaatgaaaacgcagtctacagcaatgacgtaaatgcttatgtaatcgaa
tcagacaaagaatttacaggctatgcaaatatttcaggtcctgtaagtgcaagcgtttct
tcaaacgcaattgagcttgcaaacgaaggcaaatcaattgaaatcaaggcgctcaaagac
ggcacttacaagaacgtagctgttaccgcaaaagacggcagcggcaaatcattcacttct
cctctcgtaaatcttgttgttgatacagaggctccaaaggttgagattgtatctcctgca
aatcacctctgggtacaggaaggaacaagtatcacggcaaatgttactgatgccaatgga
atcgcaaaagtcgagtattctacagacggcggtgagtcatgggcagaaatgaaggccagc
ggaagccagtacacggcaaacgtcggcgtcaagaaccgtgatgacggacttatcggaatc
gatgtccgcgctacagacacaacaggcaaatcaacagtacgctctgtcgcaattcataaa
gattcaacagctccggaggttgaagtccttctccctggtcctgatgacatcgtaaacggt
gacaacctcattgcattcaaggtaaaggataacggacgactcgacaaagtcctctacttc
ccgcctgctgcaaagggaacaactccgacaccgtcagacattccacttgctccgcttgtc
acaacccacatcggtacaaaagataagcctatcgatgatttgatgtctttcaagttcgtc
gatgcaattggaaacacaactgaaatcaagcagtggaacttcatcattgacaacgtaagc
gacctgccaatcgcagaagtccatgttccggaagaaaatgccgtaatcacccgtgacttc
gaattctcaggcgttatctatgatgatgatggaatcacaaaggacgagctgggtgaagtc
attgccggtccaaagattttctacaaattcgacaatggccgctatgaggcacttgatcag
attggaacaagcttcatcattccgaagaaactcactgacttcactgataacgagcactca
atcacaatttacgcagaagacattaacggcgtaaaaggtcctgagttcacacgcaacttc
cgcatttctcttgaagagccgaagggcgctgtcctcacaccaccaatcagcgaaactgta
aaacagacagtcaaaatgactggtatcgcaactgataaaaacggtatcaaggcagtttac
atttctgtagataacggaaactcattcaacgaggctgtcggcaacttcggtcacgaaatg
actcagtgtaactggagctacgagctcgacacccgtgtaatcgaagacggtacacacgtt
gtcttcatgaaggtcgttgactggtacggaatcgagggcttgtattcttctttgatcaac
attgataacacgcctccaaaaatcgagctcatgcttccattggatgactcaaagactacc
ggcatggtattcctctcaggtcagacaatcgataacatcaaccttacaaaactcttcatt
acaatccgttcacttgacggcaaggttgtaaactctaagctggcacgcacagacttgaag
cctgatgaaatcatcactcaggcaatggacatcacaaaccttgaggacggattctataac
atcgagcttacaggtgttgatgccgcagaaaacatcacccgcgtcagccgaaacatccag
ctcaacaaaaaggctccaaaggctaaagttgacttgctctatcctctcaacggtgaattc
gtccagggcgtattcaacatctatggtactgcagtcagcgagacagacatccagagcctc
actctcttcgtagatggaaattctgttgcagagacagaactcagcgagagcggattcttc
aaatatacacttgatcagacaatgattcaggaaggccagcacacaattcgtgtcgaggct
taccttgcagacaattcaaagattgtttctaatacccagtacctcaactacagtgctgta
ggtccgtggatcacaattgacaacttcacttacggtgacttcgcattcgaccgaccttac
atcattggtaactctggttactcttatgatgaagatgaggttgtccgtgcaaacgcaaag
ggtgctccaaaagaactcaaggaagcagttgctgcaaaagttgtagacaaggttgagctt
tctttggacaacggtaagacattcaaaaagctttcttcaagcggcaaatggcgattccgt
gttgaaaacgaggatattgcagaaggctaccacttcctgctcgttcgtgccacaatgaag
aacggtgagattgcagttacacgctgtatcgttcaggttgatagcactaaacctacaatc
aagctcatttctccgggtgccggcggtcattacaaccagcagatggaattctctggtctc
gcaaaagacgatatcgcactcaagagcctcactcttgcattgcgaagcggtgacaaggct
atgtacgaaatcccaggcttcatccagggattgtacttcgactggcagttctggggagca
acattgttcaacgttggtgcaggtcttacattctttgatgacaacgttaagcttcaggtt
cagtggggacagttcactcagcaacagcgtgacctgttcgaccagtcaaacatgcgttat
ggtggcgacaatgtattgggtgtcaaacttttggcaaacgtttactatatgccgttcaga
tactactttggtccagactgggaatggctcagtttgaatgttgcggtcggtgctaacttc
acgcgattcaacgaatccggctcaggaaaggctcagattctttctgcaggtctcttccag
ctggaattcccgcgagtcaccttctctagacagaagatgttcagaacaatcgcattctac
accgaaggtcagctttggttcatcccaaccgatgtttcttcggaagaagatatcaagagt
cttgttccacagatttcattcggtttgcgtgtgaacgtattctaa
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