Treponema ruminis: DYE50_08645 Help Entry DYE50_08645       CDS       T07166                                  Name (GenBank) hypothetical protein   KO K03086   RNA polymerase primary sigma factor Organism tri  Treponema ruminis Pathway tri02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:tri00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     DYE50_08645  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tri03021]     DYE50_08645 Transcription machinery [BR:tri03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      DYE50_08645 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 GntR FeoB_Cyto DUF956 HTH_Tnp_ISL3 DNA_processg_A TFIIE_alpha LexA_DNA_bind HTH_PafC PolyA_pol_arg_C HTH_38 Motif Other DBs NCBI-ProteinID:  QSI02634 LinkDB All DBs Position complement(1998204..1999028) Genome browser AA seq 274 aa AA seqDB search MKMYEMYLKQIQRYPLLSLESERELAVKISEGDKKAISCLVNSNLRLVVSIANKFKKTYK VSVMDLIQEGNMGLMAAAEKFSPDYENRFSTYAYPWILQYMLRFLHNKTAIISIPQRKEE VLRRISTIQNEYREVTGKKASKKDLARSLGISETELNNALDCLYTCTSLDSQCKEDGTVT VGELIPDFTYDPERNFFIEIAKSNIKQLVSELSEKERFVISGRYNFDGLVHAPTLREIGQ SLGVSAETIRQTEIKALQKIKKALNEKTLELYTA NT seq 825 nt NT seq  +upstreamnt  +downstreamnt atgaaaatgtatgagatgtatttgaaacagattcagagataccctcttttaagcctcgaa agtgagcgggagcttgcagttaaaatctctgaaggagacaaaaaggccataagctgcctc gtaaattcaaatcttcgtctcgttgtcagcattgcgaataaattcaagaagacatacaag gtttccgtaatggatttgattcaggaaggaaatatgggactcatggcggcagccgaaaaa ttctcaccggactacgaaaaccgcttctcgacatatgcctatccatggattttgcagtac atgctccgttttcttcataacaaaacggcaatcatttcaattccccagcgcaaggaagaa gttctgcgccggatttcgacaatccagaacgagtacagggaagttaccggcaaaaaagca agcaaaaaggatctcgcacgctcactcggaatctcagaaactgaactcaacaacgcactt gactgtctttacacatgcacaagcctggactcacaatgcaaggaagacggcaccgtgaca gtcggcgagcttatcccggattttacctacgacccggagcgcaatttcttcatcgaaatc gcaaaaagcaacatcaagcagctggtttcggaactttctgaaaaggaacgatttgtaatt tccggtcgctataattttgacggactggttcacgcaccgacattgcgggaaatcggccag tcactgggagtttcagcagaaaccatccgccagacagaaataaaggccctgcagaaaatc aagaaagccctgaacgaaaagacactggaattgtatacggcataa

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