Treponema ruminis: DYE50_10400
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Entry
DYE50_10400 CDS
T07166
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tri
Treponema ruminis
Pathway
tri03420
Nucleotide excision repair
tri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DYE50_10400
03430 Mismatch repair
DYE50_10400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tri03400
]
DYE50_10400
Enzymes [BR:
tri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DYE50_10400
DNA repair and recombination proteins [BR:
tri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DYE50_10400
MMR (mismatch excision repair)
Other MMR factors
DYE50_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QSI02974
LinkDB
All DBs
Position
complement(2392304..2394784)
Genome browser
AA seq
826 aa
AA seq
DB search
MSLEDDILSGINSSQTGQLSDRAKEYLSVLNPQQHEAVVHEGSPLLILAGAGSGKTRVIT
TKIAYLIGEKNVNPYSILAVTFTKKAANEMHERAVGLEPRAAEAQIRTFHSFGAWFLRVY
AEEAGVDPNFTVYDDDDVVSLIQKVEPKLTKKEAAQYARKIALAKDYCLKPDSPELLTRE
AFLNPSDFPQMYEAYEKRLRATGNVDFGDLILLPYLALEENAALREKMYRRFRVIMVDEY
QDSNVAQFKLLEALSGLNEGSGTYVCVVGDDDQSIYKFRGAEIQNILNFPKIFEGTKIVR
LESNYRSTQEILSLADNVIKNNHGRLGKTLRAERGSGKTPVLAFMSNSKFAWSRSQLEYE
VERLKKAGRENEAENLRLSFYYGDEAVFCKDLITLTHEKGTPYSDWAIVYRTNAQSREFE
GIFIEKKIPYVIVGSLKFFEREEVKDLIAWLELVANHKNEIAFHRIINKPARGIGNKTQD
AIVLASQTEHQLIEESGEIKQNFEANDIIAACRYKMKGFSAKVRGELSKFIEIFDEIDSM
FTEDTTAGGELASQLVEGESSNELKKRESRKTLAELIEKIAKKSGLAQYYEERDKDEHTF
RVENIQELANSAVPYPLARQGLLDFLDNIQLDRTLSNEDEDIAEDAVTLITLHNTKGLEF
NRVVMTGMEEGVFPRNGDDEEEMEEERRLCYVGITRAKNELYLTSCAVRRMYGHIEYMKC
SPFLLEMGREGVKAIGQLPSRYRGSSFHGGDYGERGLSHPDVEADPIKRKYCRGAKVFHD
DYGYGIIANSQTNEEGEYAITVSFENSGVKRFIPKYQESQLMIVRE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgaagacgacattctttctggcataaattcttctcagacgggccagctttct
gaccgggctaaggaatatctttcagttctgaatccccagcagcatgaggctgtcgttcat
gagggaagcccgcttttgattctggcgggagccggttccggtaaaacccgcgtaattaca
actaaaattgcctatctcatcggtgaaaagaacgtaaatccttattcgattctggccgtt
acctttaccaaaaaggctgcaaatgaaatgcatgagcgtgcggttggccttgaacccagg
gctgcagaagctcaaatccgcacattccattcctttggagcatggtttcttcgcgtttat
gccgaggaagccggtgttgatccgaactttaccgtttatgacgacgatgatgtcgtttct
ttgattcagaaggtcgagccaaaactcaccaaaaaagaggcggcccagtatgcaagaaaa
atcgcgcttgcaaaagattactgcctcaagccagacagcccggagctccttactcgtgag
gcttttttgaatccgagtgactttcctcagatgtatgaggcttacgaaaaaaggctcagg
gcgaccggaaatgttgatttcggtgatttgattttgcttccatatcttgcccttgaggaa
aatgccgcccttcgagaaaaaatgtaccgccgtttccgcgtgattatggtcgatgagtat
caggactcgaatgtggctcagttcaagctgctcgaggccctttccggcctgaatgagggc
agcggcacttacgtctgtgtagtcggtgatgatgaccagtcgatttacaaattccgtgga
gctgaaatccagaatatcctcaatttccccaagatttttgaaggaactaaaatagtccgc
ctggaaagcaattaccgttcgactcaggaaattctttcccttgcagacaatgtgattaag
aacaatcacggacgccttggaaagacccttcgtgctgagcggggcagcgggaaaactcct
gtgctggcgtttatgtcgaatagtaaattcgcatggtctcgttctcagcttgaatatgaa
gttgaaaggcttaaaaaagctggacgagaaaatgaagctgaaaatttacgtttaagtttc
tattacggagatgaggcggtattctgtaaggacttgattactttaacacatgaaaaggga
acgccttacagtgactgggctatcgtttatcgtacaaatgcacagtctagagagttcgaa
ggaatttttattgaaaaaaagattccttatgtcatcgtcggctcgctgaaattctttgag
cgcgaggaagttaaggatttgattgcatggcttgagcttgttgccaaccataaaaatgaa
atcgccttccaccgaatcataaacaaaccggcgcgtggaatcggaaacaagactcaggac
gcgatagtgcttgcttctcagactgagcaccaattaatagaagaaagcggcgaaattaag
cagaattttgaggctaatgacataatcgcagcctgccgctacaaaatgaagggcttttct
gcaaaggtgaggggcgagctttctaagttcattgagatttttgacgagattgattccatg
ttcaccgaggacacaacggctggcggcgagcttgcaagccagcttgttgaaggagaatca
agcaatgagcttaaaaaaagagaaagccgcaaaactctggctgagcttatcgaaaaaatc
gcgaaaaaatcaggccttgcccagtattatgaggagcgggacaaggacgagcacactttc
cgcgtggagaacattcaggagcttgcaaactctgctgttccttatcctcttgcacgccag
ggacttttggattttctcgacaacattcagcttgaccgcaccctttcaaatgaggacgag
gatatcgcagaagatgcagtcactttgattaccctccacaacacgaagggcctggaattc
aaccgggtcgtcatgacaggcatggaggagggcgttttcccgcggaacggagacgacgag
gaagaaatggaggaagagcgccgtctttgctatgtcggaattacccgggcaaagaacgag
ctttatcttaccagctgtgccgtgcgccgaatgtacggacatatcgagtacatgaaatgc
agtcccttcctgcttgaaatggggcgcgagggcgtaaaggcaatcggtcagctcccttca
cgctaccggggaagttcatttcacggcggagattacggggagcgtggcctgagccatcct
gatgttgaagccgacccgatcaaaagaaaatattgccgcggagcaaaagtctttcacgac
gattacggctacggcatcattgcaaattcccagaccaacgaggaaggggagtacgcaatt
acggtcagttttgaaaacagcggagtcaagcgcttcattccaaagtatcaggaaagccag
ctgatgatagtgagggagtaa
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