Treponema ruminis: DYE50_10785
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Entry
DYE50_10785 CDS
T07166
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
tri
Treponema ruminis
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tri03021
]
DYE50_10785
Transcription machinery [BR:
tri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DYE50_10785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
Phage_int_SAM_6
HTH_24
TmcA_N
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QSI03051
LinkDB
All DBs
Position
2477788..2478336
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AA seq
182 aa
AA seq
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MTDLQIHKTYAADNPSDFRAIYKETFPLLYKVAWRVVNDEEAAEDLVHDSYIKASEKKMV
FPSLDDAKFWLIRVVKNASLNYAKRKTREAKAYHKVLYESKKSSESADTNLLKEDAKRIA
LEALNKLPKSLREVLILREYGDLNYKEIGKVLGITEGNVKIRMFRAREQLEKILEADDVY
IS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttacagattcataaaacatatgcggctgacaatccgtctgacttcagggct
atttacaaggaaacattccccctgctatacaaggtggcgtggcgagttgtaaatgacgaa
gaggctgctgaagacctggttcacgactcttacatcaaggctagcgaaaagaaaatggtc
tttccaagccttgacgatgcaaaattctggcttatccgcgtagtcaaaaacgcaagcctc
aattatgcaaagcgcaagacccgtgaggcaaaggcttatcacaaagtcctctacgaaagc
aaaaagtcttccgaaagcgcggacacaaatctgctcaaggaagatgcaaagcgaatcgcc
ctcgaagccctcaacaaactcccgaaaagtttgcgcgaagtcctgattttgcgcgaatac
ggagacctcaactacaaagaaatcggcaaggtgctgggcattaccgaaggcaatgtcaaa
atccgcatgttccgtgcgcgagagcagcttgaaaagatattggaggctgatgatgtctac
atctcttga
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