Treponema ruminis: DYE50_12180
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Entry
DYE50_12180 CDS
T07166
Name
(GenBank) AraC family transcriptional regulator
Organism
tri
Treponema ruminis
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
dCache_1
GGDEF_2
DUF7248
Motif
Other DBs
NCBI-ProteinID:
QSI03323
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Position
2803845..2806091
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AA seq
748 aa
AA seq
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MYNTKMVKREKSFFLKIFASYVALLAVLLAMGVVLYVHASGEIKDQIESQGEQSLVQVEK
AFNAEFQNVEMMLTQISMRPEVRSFMLEDKVNDAEDAYHLKQIINSLSSYSLLSDFIGNY
YIWFWKNDYVITRSYAYRSDDFFRLCYGDSGMSYEQWEASKKARTPYVGYERTVPSEFEG
SGGGNVIEYGLSVPLGVGPALGCITAMVDESQVQALLSQSAPWGVSYAYIADNRGNIVSF
YGAGEQDICRPDELPAGDHGYFTWGRGSSRLFLSYARSGDGKWQYVIACSPLEMLSPVVR
MRNRYLLLLGALFAISLLCVFFLSFHQSKPLGDIASSLAAKDISAHDLGSLKEAVSSLIR
DNDAFAEERVRQDEILHSVFLLRLLQGTLSSGPNSFDKDIERLQILVAKRYQVVLMHLEG
ADGEDPLADVRLVLKRKAEENFEDFRLETVDIDARTIAFICFSDVDDNIACGQQIQSWFD
ALSREMERVLHLRQIVVQGSVVDTPSRIQESYGQATYALQNKLLGGGGSGAGMERGTGYP
LAMEMHLVNATYDGDVDAIRAILTNLFRQNNMFVHADNEELLLMLAALKNTLLRILQSSF
GPSADTTLLKNQIESIERLDQEDILGVFAQVSGALVVQRKGEKEEFARKMLSYVDAHYLE
KNFSLTSVSDHFRLNESYVSTYFKKHYHVNFLMYVKKRRLDEAARLLKDSGMPVESISHM
TGYSNSHSFRRAFKERYGISPAEYRNRS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatacgaaaatggtgaaacgggaaaaatcgtttttcctcaaaatttttgcttca
tatgtcgccttgcttgcggtgctgctcgcaatgggggtggttctctacgtgcatgcctct
ggggaaatcaaggatcaaattgaaagccaaggggaacagagcttggtccaagtggagaag
gctttcaacgccgagttccaaaacgtggagatgatgctgactcagatttcgatgcgtcca
gaagtccgttcattcatgcttgaggacaaggtgaacgatgcggaagacgcctatcatctg
aagcagattatcaacagcctctcctcgtattccttgctttcggactttatcggcaactac
tatatctggttctggaagaacgactacgtgattacccgctcctatgcgtaccgttccgat
gattttttccgcctctgctacggagatagcggtatgagttatgaacaatgggaggcttcc
aagaaagcaaggactccctatgtggggtacgaacgtaccgttccttcggagtttgagggg
tcgggagggggaaatgtcatcgaatatggcctttccgtcccgcttggggtcggacctgct
cttggatgtatcaccgcgatggtcgacgagtcccaggtgcaggcattgctttcccagtcc
gcgccttggggggtgagttacgcttatatcgccgataaccggggaaacatcgtgagcttc
tatggagctggagagcaggacatctgtcggcctgacgaacttcctgcaggagaccacggg
tatttcacctgggggcgcggctcgagccggcttttcctttcgtacgcgcgaagcggagat
ggaaaatggcagtacgtaatcgcctgttccccactggagatgctcagccccgtagttcgc
atgaggaaccggtacctgctccttcttggggcgcttttcgcgatttccctgttgtgtgtc
ttcttcctttccttccatcaatccaagcccctcggggacatcgccagttcgttggccgcc
aaggacatttccgctcacgacctagggtcgctaaaagaagcagtaagtagcctaatccgg
gacaacgacgcctttgccgaggaacgagttcggcaggatgaaatactccattcggttttt
ctgcttcgccttcttcaggggacattgtcctcaggcccaaattctttcgacaaggatatt
gagagattgcagattttggtagccaaacgctatcaggtagtgctgatgcatcttgagggt
gcggacggcgaggatcctttggcggacgtccgcttggtgctgaagaggaaggcagaggag
aacttcgaggatttccgtctggaaaccgtcgatatcgatgcacggaccattgcgtttatc
tgtttttctgacgtagatgacaacatcgcatgtggccagcagatccaatcctggttcgac
gcgctttcccgtgagatggaacgtgtcttgcatctccggcagattgttgtccaaggaagt
gtcgtggataccccttcgcggattcaggaatcctatggtcaggctacatatgcacttcag
aacaaactgcttgggggtggtggcagcggcgctggcatggagcgggggactggctatccg
ctcgccatggagatgcatttggtcaacgctacctacgatggcgatgtggatgcaatccgg
gctatcctcacgaacctgttccggcaaaataacatgtttgtccatgcggataacgaggag
ctactccttatgctggcggccctgaagaacactttgctgagaattctgcaatcctcgttc
ggtccttcggcagatactacgttgctcaagaatcagattgaatcgatagaacgattggac
caagaggacatcctgggtgtctttgcgcaggtttcaggagccttggtagtccagcgaaag
ggtgagaaggaggagttcgctcggaagatgctctcctatgtcgatgcacattatttggag
aagaatttctccctcacctccgtgagcgaccacttccggcttaatgaaagctatgtctcc
acttatttcaagaaacattaccatgtcaatttcctgatgtatgtgaagaagcgtagactg
gatgaagccgcacggttgctcaaggattccggcatgcctgtagagtctatctcccacatg
accgggtattccaatagtcattcgtttcgcagggcgttcaaggaacgctatggcatcagt
cctgctgaatatcggaatcgctcgtag
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