Treponema ruminis: DYE50_12275
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Entry
DYE50_12275 CDS
T07166
Name
(GenBank) fibronectin type III domain-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
tri
Treponema ruminis
Pathway
tri00040
Pentose and glucuronate interconversions
tri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DYE50_12275
Enzymes [BR:
tri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
DYE50_12275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
fn3
Disaggr_assoc
Motif
Other DBs
NCBI-ProteinID:
QSI03342
LinkDB
All DBs
Position
2824621..2827479
Genome browser
AA seq
952 aa
AA seq
DB search
MKKTLASLWLLVSSSLLFASWAGTKAPVITSIAPSTSDPFQVEVRFDFETSGEAGDKASV
ECYDARGNLVDAKLVGRSRKLGKKALFSLSSSGDYSFVVRGQKRNEEDKLSPCQSFHYSY
PLVPPEVTVKNTGNYAFLVSWKPVREAEAYLVSVGEEEYQTNDLSCSFNALRPEKTYQVT
VSALRDRTRATSSQRKTARKDADRDWRFTWFGQSTKGTLNRMEMLDADNLRFRLFSCSES
PNGDIDEKGGKFTAFHDGISYYYTVIDPKRENFTLTATFTVDFLNPTPDGQEGFGIVAMD
SLGKDGVSMENHYTNSAAILATKFEDTIDGVKHTCKDTLGSRFVTGLTDAIVQGGDSEIA
KHAKSVSKAYSYYYYDLVRKGQTYTITLQMDNTGFHAIYPSTGADKGQVEEYILYGKDKL
LQQDPDHIYVGFAVARGCNVTVSDVRFATSDPRSDPPARQAPPEYVPYSLKIDSPTSWYD
GRYQFVYAANSDGRLSVSDGKRNPHYYIQDAPVKAGVDFSAVIPIRKGVNDMLVTFTPSR
EYIPYPGARMGVLNPTTRKYEENYQPVAKTLTVFYVPKEGDTLYVSPGGDPLAKGSRQSP
LDLDSALRSCAPGQTVVLLPGTYHPTGSVKIERGNSGLEGKRKQLVGEGNVVLDFSSGSG
SFELWGDYWTLEHFTVTGTKGDKKGLQIAGDFNELRFVTAYGCGDTGIQISGTSTEPFAK
WPHDNLVYGCVSHDNIDPAANNADGFAAKLTCGENNVFDSCVAYANIDDGWDLFSKIETG
PIGAVTIRRCLAYGNGSLSDGSGNGDGNGFKLGGDGIAVPHLLERSVAFQNGAAGVTSNS
NPAVRLSQVVCWANAGRNVALYGKGNGPRQFQARDVVSVDGADSDNWSEMPGLAEETTFF
WNGAEAVNSQGRRLSKDVFLSTVFQGFRLDGQGLDLGDFLKVRTGLGFSAGL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacactggcatcgctgtggttgctggtgtcctcctcgttgctgttcgcatcg
tgggccggcacgaaggcgccggtcatcacttccatcgccccttccacttcagacccgttc
caggtcgaggtcagatttgatttcgagacgtcgggcgaagcgggggacaaggcgagtgtc
gagtgctacgacgcgaggggaaacctggtggacgccaaactggtcggccggagccgcaag
ctggggaaaaaggcccttttttcgctttcctcctcaggcgactactcgttcgtggtccgt
gggcagaagcggaatgaggaggacaagctttccccttgccaatcattccactattcgtac
ccgctcgtgccgccggaagtgacggtgaagaatacagggaactatgcctttcttgtcagt
tggaaacctgtcagggaggcggaagcgtatctcgtatcggtcggagaggaagaataccag
accaacgacctttcctgctcgttcaatgcgttgcggccggagaagacctaccaggtcacc
gtttccgccctccgggatagaacgcgggcgacatcaagccagcgcaagaccgcgcgcaag
gatgcggatagggactggcgcttcacctggttcggacagtcgaccaaggggacgctcaac
cgcatggagatgctcgacgcggacaacttgcggttccgcctcttctcctgctcggagtct
cccaatggcgatatcgacgagaaaggtggcaagttcaccgccttccatgacggtatttcc
tactactatacggtcatcgatccaaaacgggaaaacttcacgctgacggctacctttacc
gtcgatttcctcaatccgactcccgatgggcaggaaggcttcggcatcgtggcgatggat
tcgcttggcaaggatggcgtttccatggaaaaccactacaccaactccgcggcgatcctc
gccaccaagttcgaggacacgatcgacggggtgaaacatacctgcaaggatacgcttggc
tcccgtttcgtcaccgggctgaccgatgcgatcgtccaaggcggggattcggaaatcgcc
aagcacgccaagagcgtcagcaaagcctatagctactattactatgatctggtgcggaag
ggacaaacgtataccatcaccttgcagatggacaacacgggtttccatgccatatatccc
agcacgggtgccgacaagggccaggtcgaggaatatatcctgtacggcaaggacaagctg
ctccagcaggatcccgatcacatctacgtcggtttcgccgttgcccgcggatgcaatgtc
acggtcagcgacgtgcgctttgccacaagcgacccgcggagcgacccgcctgccagacaa
gcgccgccggagtacgtgccgtattcgctgaaaatcgattcccctaccagctggtacgac
gggcgctaccagttcgtctatgcggccaacagcgacggccggctatcggtcagcgacggg
aaacggaaccctcattactacatccaggatgctccggtgaaggcgggagtcgacttctcc
gcggtcatccccatccgcaaaggggtcaacgacatgctcgtcaccttcaccccgagcagg
gagtacattccctacccgggcgcacgcatgggagtccttaacccgacgacccggaagtac
gaggagaattaccagccggtcgccaagacgctgacggtcttctacgtgcccaaggaagga
gataccctctacgtttccccgggcggcgacccgcttgccaaggggagccgtcagagtccg
ttggacctggacagcgcgttgcgttcctgcgccccgggacagacggtcgtcctgcttccc
ggcacctaccatccaaccggttccgtcaagatcgagcgaggcaacagcggtctggagggc
aagcggaaacaactggtgggagaggggaatgtggtcctcgatttttcctctggctccggc
tccttcgagctctggggcgactactggacgctggaacacttcaccgtgaccggcaccaag
ggcgacaagaagggattgcagatagccggggacttcaacgagctgcgctttgtcaccgcc
tatggttgcggggacaccggcatccagatttccgggacgagcaccgagccttttgcgaaa
tggccgcatgacaacctggtctacgggtgcgtcagccacgacaatatcgaccctgcggcc
aacaatgccgatggcttcgccgcgaagctgacctgcggggagaacaatgtgttcgattct
tgcgtcgcctatgcgaacatcgacgacgggtgggacctcttctccaagattgagaccgga
ccgattggcgcggtgaccatccgccgctgccttgcctacggcaacggaagcttgtcggac
gggagcgggaacggggatggcaacggcttcaagctgggtggagacgggattgccgtgccc
catctgctggaacgttcggttgccttccagaacggggcggcgggtgtcaccagcaattcc
aacccggccgtccgcctttcccaagtggtctgctgggccaacgccgggcgcaatgtcgcc
ctctacgggaaagggaatggcccccgccagttccaggcaagggatgtggtctctgtcgat
ggggcggactccgacaactggagcgagatgcccgggcttgccgaagagaccacctttttc
tggaatggagcggaggcggtcaacagccaggggaggcggctgtccaaggatgtgttcctc
tcgacggtcttccagggcttcaggcttgacggacaaggcctcgaccttggggatttcctg
aaggtgaggaccggcctcggattctccgccggcctctaa
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