Thermococcus radiotolerans: A3L10_00340
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Entry
A3L10_00340 CDS
T05177
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
trl
Thermococcus radiotolerans
Pathway
trl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L10_00340 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trl03021
]
A3L10_00340 (tfb)
Transcription machinery [BR:
trl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L10_00340 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L10_00340 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Zn_Ribbon_Prim
Sigma70_r4
HTH_Tnp_ISL3
HTH_AsnC-type
RB_B
RUBY_RBDX
Zn_ribbon_tTFIIB
FtrD-like
Zn_ribbon_IS1595
HTH_24
ADK_lid
Zn_ribbon_RRN7
ORC6
Ribosomal_S27e
FYDLN_acid
Lar_restr_allev
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASJ13650
UniProt:
A0A2Z2MZQ1
LinkDB
All DBs
Position
52948..53847
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AA seq
299 aa
AA seq
DB search
MSKRRVCPVCGSTEFIYDPGRGEVVCKVCGYVIEENVIDMGPEWRAFDASQREKRARVGA
PESILLHDKGLSTDIGIDRNLSGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIA
SQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEIADISR
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAVAILDEAYEKG
LTSGKSPAGLVAAALYIAGLLEDEKRTQREVAEVARVTEVTVRNRYKELVEKLNLKIPV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagcgtagggtctgcccggtttgtggctcaacggagttcatctacgacccgggt
aggggagaggtcgtctgtaaggtttgcggttacgttatcgaggagaacgtcatagatatg
ggtcccgagtggcgcgcctttgacgcgagccagagggagaagagggcgagggttggtgcc
cccgagagcattctccttcacgataagggtctctcaacggatattggaatcgacaggaac
ctttccggtttgatgcgtgagaagatgtaccgcctgaggaagtggcagagccgcctccgc
gtgagcgatgccgccgagcgtaacctggcctttgccctgagcgagctggacaggattgct
tcccagctcaagcttcccaggcacgtcgaggaggaagctgcccgtctgtaccgtgaggcc
gtgaggaagggcctcataaggggacgctcgatcgagagcgttatagcagcgtgcgtctac
gccgcctgcaggctcctcaaggttccgaggaccctcgacgagatagcagacatatcccgc
gttgacaagaaggagataggcaggagcttccgcttcatagcgagaaacctcaacctcaca
ccgaagaagctcttcgtcaagccaaccgactacgtcaacaagttcgccgacgagctcgga
ctcagcgagaaggtcaggagaagggccgtggcgattctcgacgaggcctacgaaaagggc
ctcacgagcgggaagagccccgcaggcttggtcgcggccgcgctctacatagccggcctt
ctcgaggacgagaagagaacccagagggaagtcgcagaggtcgcgcgcgtcaccgaggtc
accgtgaggaacaggtacaaggaactcgtcgagaagctcaacctgaagattccggtttga
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