Thermococcus radiotolerans: A3L10_00670
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Entry
A3L10_00670 CDS
T05177
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
trl
Thermococcus radiotolerans
Pathway
trl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L10_00670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trl03019
]
A3L10_00670
03009 Ribosome biogenesis [BR:
trl03009
]
A3L10_00670
Enzymes [BR:
trl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3L10_00670
Messenger RNA biogenesis [BR:
trl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3L10_00670
Ribosome biogenesis [BR:
trl03009
]
Prokaryotic type
rRNA helicases
A3L10_00670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
DUF2278
CMS1
Motif
Other DBs
NCBI-ProteinID:
ASJ13713
UniProt:
A0A2Z2MZH6
LinkDB
All DBs
Position
complement(110574..111809)
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AA seq
411 aa
AA seq
DB search
MSFESLGLSRATLVAVREKGFETPTDIQREVIPRLLSGDVDIIGQSQTGTGKTAAFALPI
IEAIDPKIKAVQAIILTPTRELALQVADEIKSLRGRKRVYVYAIYGGQPIGPQIRALERG
THVVVGTPGRVLDHIRRRTLDLSSVKFFILDEADRMLDMGFIDDIEAIFRETPRRKRVLM
FSATMPPEIRRLARRYMGNYEVISVSSDELVPEMVDQEYIEVVPARKFTVLKKILSDDFY
GIVFCATKRETRELSEKLRRGGYSAEALNGDMSQAARERTFWRFKTKRTRILVATDVAAR
GLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKRGRAITFIMPGEFKRLRYIAQVAGVE
IRKSELSEDIPKEYRERYERGPSDGYRRNGRRNSRYPRNSRGYSKNSRGRW
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaagcttaggcttatccagggccacgttagtggcggttagagagaagggt
tttgagaccccaacggacattcagagggaagtcattccacgtcttctatcgggcgacgtc
gatataatcggccagtcccagaccgggacgggaaagaccgctgcctttgcactccccata
atcgaggcgattgacccgaagataaaggccgttcaggcgataatattgacccccacgagg
gagctcgccctccaggtggcggatgaaatcaagagcctccgcgggaggaagagggtttac
gtctacgccatctacggcggccagccgatagggccgcagatcagggcgcttgagcgggga
acccacgttgtagttggaacccccggcagggttctcgaccacataaggcgcaggaccctc
gatctgagctccgtgaagttcttcatcctcgatgaggccgacagaatgctcgacatgggt
tttatagacgacatagaggcgattttcagggagaccccgaggaggaagagggtgctgatg
ttctccgcaacgatgccccccgagattagaaggctcgcgaggcgctacatggggaactac
gaggttataagcgtcagcagcgacgagctcgtgcccgagatggtggatcaggagtacata
gaggtcgttcccgcgagaaagttcacggtgctgaagaagatcctcagcgacgacttttac
ggcatagtcttctgcgccaccaagagggaaaccagagagctgagcgagaagctcaggagg
gggggctacagcgccgaggctttaaacggcgacatgagccaggccgcccgtgagagaacc
ttctggcgcttcaagactaagcgaacgaggattctcgtggcaaccgatgttgccgcgcgc
ggcttggacgtccaggacataagccacatcgtcaactactccctgcccatgacggccgag
gactacgtccaccggatagggagaaccggcaggatgggcaagcggggaagggcgataacc
ttcataatgcccggcgagttcaagaggctgcgctacattgcccaggtagctggtgtggag
ataaggaaatccgagctcagcgaggatatcccgaaggagtaccgggagaggtacgagcgc
ggcccttcggatggctacagaagaaacggaagaagaaactctcgctaccccaggaactcc
cggggctattctaagaactcccgaggtagatggtga
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