Thermococcus radiotolerans: A3L10_07235
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Entry
A3L10_07235 CDS
T05177
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
trl
Thermococcus radiotolerans
Brite
KEGG Orthology (KO) [BR:
trl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trl03400
]
A3L10_07235
DNA repair and recombination proteins [BR:
trl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3L10_07235
Archaeal homologous recombinant proteins
A3L10_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_13
AAA_29
AAA_21
ABC_tran
SbcC_Walker_B
Baculo_PEP_C
HMBD
Crescentin
FtsK_SpoIIIE
ABC_ATPase
Uso1_p115_C
RsgA_GTPase
DUF6011
DUF5679
ApbE
Motif
Other DBs
NCBI-ProteinID:
ASJ14936
UniProt:
A0A2Z2NB18
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All DBs
Position
1298760..1301417
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AA seq
885 aa
AA seq
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MKIEKLIIKDFRSHGLTKVNFTSGINLIIGQNGSGKSSLLDALLVGLYWPSKPKDLRKED
ILRVDGKSTEITVFFEKDGIKYQLHRNITRGMAFAKYHDGSSWKHATETSQKAVRDWMEK
LVPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENAYKNLLEVRKEIERRIK
STEDYLKSTENLDELIGEMERELSNALKEINELSPQIPKLEKELERVEKKLGELDALEKE
INSLRLEAKEREGNRKRLETKLEGLEKRIAESKQRLRELEERVKEFRKLKEKAELYLKLS
NFRKRYVDEKARNEKLAENYRAQISAIEERLAELSELEKRLKELEKERGKLERKLKRLEK
DARAYEDARSMSSQLEGLRKRLKLSREEIEKLSAEVEGAKRRKEEIQVELNEINEERGGL
KNLAKERNKAIMELKKAKGKCPVCGRKLTEKHRKEIIEKYQAELKNVSQSLKELDERERK
LRSELVRIEKVLKREHELIAAKELLDQIAGLEEKLKGHDLEKLRKKAEEYEGVKSELSRL
EGELESTKAELEKAKALEKKRTLTEGKLKSIEEKLRKLDEELEGMGFSKIEELDEKLAEL
EPSYKRYLELKNSEKEFEREKNNLERLTLELEEVKRSLDAESRALKALMDELAKKEKLYS
REEHEKTREAFASLREELAGKKAQLEALEKKRDETMANLRKLKEEKDRRKEKAKELEELK
KARERVQELREKVRRYKAMLKEGALAKVGEIASEIFEELTEEKYSGVTVKAEENKIRLGV
LYNGREYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDDERRRRLVDIM
QRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVKEVELGV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaaaagctcataatcaaggacttccgctcccacgggctgaccaaggttaac
ttcacgagcgggataaacctcataatcggacagaacggctctggaaagagctcccttctc
gatgcactcctcgtcggcctctactggccgagcaagcccaaagacctcagaaaggaggac
atactcagggtggacggaaagtccacggagataacggtcttcttcgagaaggacggcatc
aaataccagctccacaggaacataaccaggggaatggccttcgccaagtaccacgacgga
agctcctggaagcacgccacggagacgagccagaaggccgtgagggactggatggagaag
ctcgttccgtacgacgtcttcctcaacgcgatttacataaggcagggggagatcgatgcc
atccttgagagcgacgagagcagggagaaggtcgtccgccaggttctcggcctcgacagg
tatgaaaacgcctacaagaacctcctcgaagtgaggaaagagatagaacgcaggataaaa
tcgacggaggactacctgaagagcacggaaaacctcgacgagttgattggggagatggaa
agggagctctcaaacgccctcaaagagataaacgagctctccccccagattccaaagctg
gagaaggaactggaaagggtggagaaaaagctcggggagcttgatgccctggagaaggag
ataaactccctcagacttgaggccaaggagagggaagggaaccgaaagcggcttgagacg
aagctggaggggcttgagaaacgcatagccgagagcaaacaaagattgcgtgagctggag
gagcgggtgaaggagttccgtaagttgaaggagaaagccgagctctacctgaagctctcg
aacttcaggaagcgctatgtggacgagaaggccagaaacgagaagctcgccgagaactac
agggcacagatttcggcgatagaggagcgcctcgccgagctgagtgaactggagaagcgc
cttaaggagctggagaaagagaggggcaagctcgaaaggaaactcaagaggctcgaaaag
gacgcccgggcatacgaagatgccagatctatgtcgtcgcagctggaaggcctcagaaaa
cgcctcaagctctccagagaagagatagaaaagctctccgccgaggtcgagggtgcaaag
aggaggaaggaggagatacaggttgagttaaacgagataaacgaggagcgcggtggactg
aaaaacctggccaaggaaaggaacaaggccataatggagctcaagaaggccaagggcaaa
tgtcccgtctgcggcagaaagctgaccgagaagcacaggaaggagataatcgagaagtac
caggccgagcttaagaatgtctcccagtctctgaaggaactcgacgagagggagaggaag
ctcaggagcgagcttgtcaggatagagaaggttctgaagagggagcacgagctgatagcc
gccaaggagctcctcgaccagatagccggccttgaggagaagctgaagggacacgacctt
gagaagctcaggaaaaaggcggaggaatacgagggagtgaagagcgaactgagcaggctc
gagggtgagctggagagcacgaaggccgagcttgagaaggcgaaggccctcgaaaagaag
aggacactcaccgagggaaaactcaagtcgatcgaggagaagctgaggaagctcgatgaa
gagctcgaggggatgggcttctccaagatagaggagctcgacgaaaagcttgccgagctt
gaaccgtcctacaagcgctacctcgaactgaagaactccgagaaagagttcgagagggag
aagaataacttggagcggctcacgctggagcttgaggaggtaaaacgcagcctggatgcc
gagagcagagccctgaaggcgctgatggatgagctggcaaagaaagagaagctttacagc
agggaggagcacgaaaagacccgggaagccttcgcctcgctcagggaagagctggccgga
aagaaggcccagctggaggccctagagaagaagcgcgacgagaccatggcgaacctcagg
aagctcaaggaggagaaggaccgcagaaaggagaaggcaaaggaacttgaggagcttaag
aaggcccgcgagagggttcaggagctcagggagaaggtgaggcgctacaaggccatgctc
aaggagggggcactggcaaaggtcggcgagatagccagcgagatattcgaggagctgacc
gaggagaagtactccggggttaccgtgaaggcggaggagaacaagataaggctcggggtg
ctgtacaacggcagggaatacggcctcggattcctcagcggtggggagaggatagcccta
ggcttggccttccggctggcgctctcgctttatctcgcgggagagataagcctgctcatc
ctggacgagccaacaccttacctcgacgacgagaggaggagaaggctcgtcgacataatg
cagcgctacctgaggaagataccgcaggtcatagtcgtttcgcacgacgaagagctgaaa
gacgccgccgacagggtaatacgggtgagccttgagaacggcgtctcggtggtcaaagag
gtcgagctgggggtgtga
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