Treponema sp. OMZ 838: JO41_00350
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Entry
JO41_00350 CDS
T03454
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
trm
Treponema sp. OMZ 838
Pathway
trm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JO41_00350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trm03400
]
JO41_00350
Enzymes [BR:
trm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JO41_00350
DNA repair and recombination proteins [BR:
trm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JO41_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
Helicase_C
Zn_ribbon_PriA
ResIII
AAA_30
ATPase_2
nSTAND_NTPase5
Bac_DnaA_C
SLFN-g3_helicase
PIF1
AAA_25
AAA_22
ADDB_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AIW88434
LinkDB
All DBs
Position
complement(76243..78240)
Genome browser
AA seq
665 aa
AA seq
DB search
MAQWLELVFKLPLYQSFFYRNAAADGQQSLAGRRAAVRFGSRKLVGFIVAEYETLPKSCP
FAEADIKPIDRIIDAEPLFTDEQAALARWMSRFYICAEGIALSAMLPSGKREAGELNTDG
IEFAGTDFSASALTLSEEQRFAVEAISDCTGGEFFYVYGITGSGKTEVFLQAASRVLAAG
KSVIYLVPEITLSHQVAETVKKRFGDRCAVLHSGLTGSKRLAEWRRIARGEARIVVGVRS
AIFAPVRDLGLIIIDEEHDGSYKSGFAPRYHARQVAMYLCKKHGCPLVMGSATPSVEAWH
LMKTGAIRTLRLSERLSGGALPHIRIESLLHTAGALSTALIDEMRRTKTQGEQTILFLNR
RGFSHFFKCKNCGHELLCKNCSVPLTFHKSEGLMKCHYCGWTAKPPSACPECGSIEAGYT
SIGTEYIEEQVRKTFPDCTVQRIDTDVLQKNKQAVHILNNFRDGTIDILLGTQMIAKGLN
FPGVRLVGIALADTGLQMPDFRAAERTFSLIMQVAGRAGRYVPDGEVIIQTYNPYHPAIV
CAQHNDVEGFYTQELQQRQALEFPPFARLIRLVFRSKDQHKAEEAAFGARELLPQLFPPD
AAEGIEILGPSDCMLSLVAGNHRMQLLLRAETLAPMQKAVYRFITEYKAAVGVYIETDVD
PVSLL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtggcttgagcttgtctttaagcttcctttatatcaatcatttttttaccgg
aatgccgctgcggacgggcaacaatccttggctggcaggcgggcggcggttcgattcggc
tcgcgcaagctcgtcggttttattgttgcggaatatgaaacgctgcccaagagctgcccc
tttgcggaagccgacataaagccgatcgaccgcatcatcgatgcggaaccgcttttcacc
gatgagcaggcggcgctcgcccgttggatgtcccgcttttatatctgcgccgaggggatt
gcgctttccgcaatgctgccctccggcaaacgtgaagcgggggagctgaataccgacggg
atcgaattcgccggaaccgatttttccgcctcggcacttacgctttcggaagaacaacgc
ttcgccgtagaagcaatttccgactgcaccggcggcgagttcttctatgtgtacggcatt
accggttccggtaaaaccgaagtctttttacaggccgcttctcgtgtgcttgctgccgga
aaatcggttatctaccttgtgcccgaaattacgctgagccatcaggttgcggaaaccgtc
aaaaagcgtttcggcgaccgctgcgcggtgctccattcgggactaaccggcagcaagcgg
cttgcggaatggcggcgtattgcgcggggcgaggcgcggattgtcgtcggagtacgcagc
gccatatttgcccccgtccgtgatttgggactcatcatcatcgacgaggaacacgacggt
tcgtataagtcgggttttgcgccccgctaccacgcgcggcaggttgcgatgtacctctgc
aaaaaacacggttgtccgctggtgatgggttcggcaacgccgtcggtagaggcatggcat
ttgatgaaaaccggcgcaatccgtactctgcggctgagcgagcggctttccggcggggcg
ctgccccatatccgcatcgaatcgctgttgcatacggccggagcgttaagcactgcgctg
atcgatgaaatgcgccgcaccaaaacccagggggaacagaccattctctttttgaaccgc
cgaggcttttctcatttctttaagtgtaagaactgcggacacgagctcttgtgtaaaaac
tgttcggtgccgctcacttttcataaaagcgaggggctgatgaagtgccactactgcgga
tggacggcaaagccgccgagtgcctgccccgaatgcggctccatcgaggcgggctatacg
agcatcggcacggaatatattgaagaacaggtgcggaaaaccttccccgactgtaccgtt
cagcgtatcgataccgacgttctgcaaaaaaacaagcaggcggttcacatcttaaataac
tttcgggacggcactatcgatattttactcggtacgcagatgattgccaaaggcttaaac
tttcccggcgtgcggctggttggaattgcgcttgccgataccggcttgcagatgcccgat
tttagagctgccgagcgcactttttcgctcatcatgcaggtagcgggcagggcagggcgg
tatgttccggatggggaggttatcattcaaacctataatccctatcatcctgcaattgtc
tgtgcgcagcacaacgatgtggaaggtttttatacgcaggagctgcagcagcggcaggcg
ttggaatttccgccctttgcccgtcttatccggctggtgttccgtagtaaagatcaacac
aaagcggaagaagccgctttcggcgcacgggagcttttaccgcagctgtttccgccggat
gctgcggaaggcatagaaatacttggcccgtccgactgtatgctttcacttgtagcgggc
aatcaccggatgcagctgctgttgcgcgccgaaacgctcgcaccgatgcaaaaagccgtc
taccggtttatcaccgaatacaaagcagctgtgggtgtgtatatcgaaacggatgtcgat
cctgtcagtttattgtga
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