Treponema sp. OMZ 838: JO41_01240
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Entry
JO41_01240 CDS
T03454
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
trm
Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trm03032
]
JO41_01240
03400 DNA repair and recombination proteins [BR:
trm03400
]
JO41_01240
Enzymes [BR:
trm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JO41_01240
DNA replication proteins [BR:
trm03032
]
Prokaryotic type
DNA Topoisomerases
JO41_01240
DNA repair and recombination proteins [BR:
trm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JO41_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF3294
Motif
Other DBs
NCBI-ProteinID:
AIW88586
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Position
272271..274784
Genome browser
AA seq
837 aa
AA seq
DB search
MEEIKTPEGGVLIPIPIETEVKRAYIDYSMSVIVSRALPDVRDGLKPVHRRILYSMEEKN
LRYSGPTRKCAKIVGDVLGSYHPHGDASVYDALVRLGQDFSLRYPVIHPQGNFGTIGGDP
PAAYRYTEAKMARLAESMVEDIKKDTVDFIPNFDDSTQEPTVLPGKFPFLLANGSSGIAV
GMATNMPPHNLREIAQAVSAYIDNPDITIDELAKYIKGPDFPTGGIIFGKKGIRQAFKTG
RGKILVRGRFNIEVDKKGKETIIFTEVPYQVNTTALVAKIGELAREKVIEGIVAVNDETS
DRAGLRLVIELKRGAIAKVVLNQLFSKTALQSSFGVINLALVDGRPQTLTLKQLVGYFVA
HRQEVVTRRVRFDLKKAEERAHILRALIVAIDNIDEVIKIIRGSRDTASAKNALMERFSF
DDIQAQAIVDMQLKRLTSLEIEDLRKELQELELLIEHLKDLLAHPEKILALIKQETDELA
EKFGDDRRTDIVSDEVEEINIEDLIKKEQMVVLVSNLGYIKRVPVTAYKRQNRGGKGSNS
AALVEDDFIDQIFTASTHDYIMFITNEGKAYWVKVHEIPEASRTSRGSHIKSLLAVSSDE
EITTIVSLKEFSSDTYLLMATAGGIVKKVQTDSFQNAKTRGIIAIKLDEGDKLVSAILTT
GKDELMLVTRHGQALRVSETEIRDQGRASHGVIGIRLSGGDELTGALRINGGKLLVMSEN
GYGKRVDFSEFSPHGRGTGGQKVYTITEKTGEVVGLLAVADDDEIVCITGQGKTIRVQVS
SINVMGRAAQGVKILDIESPDQLIGLDVVAREDEEDIAPPASETTFNGELDLDGGDV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagataaaaacgccggaaggcggggtgttaatccccattccgattgaaactgaa
gtaaaacgtgcatatatagactattcgatgtcggttattgtgagccgtgccctgcctgat
gtgcgggatggcttgaagccggtacaccgcagaatcctctattcaatggaagagaagaac
ttgcgttattcgggcccgacgcgcaaatgcgctaagattgtcggtgatgtactgggaagt
taccatccgcatggcgatgcctccgtctatgatgcgcttgtccgtttggggcaggatttt
tccctccggtatccggtaatccatccgcaaggaaacttcggaaccatcggcggcgacccg
cctgcagcctaccgttatacggaagcaaagatggcgcggcttgcggagtcgatggtagag
gatatcaaaaaagataccgttgattttattccaaactttgacgattctacgcaggagccg
accgtcctgccgggcaaatttccatttctattggcgaatggttcaagcggtatcgccgtc
ggtatggcaaccaatatgccgccgcacaacctacgtgaaattgctcaagcggtgtccgcc
tatatcgacaatcctgacattaccattgatgagcttgccaagtacatcaaaggaccagac
tttccgaccggcggtattatcttcggcaaaaagggcatccggcaggcgtttaaaaccgga
cgcggaaagattttagtccgcggcagattcaatatcgaagttgacaaaaaaggcaaggaa
acgattatctttaccgaagtgccttatcaggtaaacaccacggcgctcgttgctaagata
ggtgaacttgcccgtgaaaaagtaatagaagggattgtggcagtcaacgatgaaacctca
gaccgcgccggcttacggctggttatcgagctcaaacgaggggctatcgcaaaggtggtg
ctgaaccagctcttttccaagaccgcgctgcagtcatccttcggcgttattaaccttgca
ttggtggatgggcggccgcaaacactgacgctcaaacagctggtcggctactttgtggca
caccggcaggaggttgttacccgccgcgtccgtttcgacctgaaaaaagctgaagaacga
gctcatattttacgtgctcttatcgtcgccatcgacaacatcgatgaggtgatcaagatt
atccgcggctcccgcgatacggcaagcgccaagaatgcattgatggagcggttctcgttt
gacgacatacaggcgcaggccatcgttgatatgcagctcaagcgcctcaccagcctcgaa
attgaagacctccgcaaggaattacaggagcttgaactgctgatcgaacacctgaaagac
ctcttggcgcatcctgaaaagattcttgcgctgattaagcaggaaaccgatgaacttgca
gagaaattcggcgatgaccgccgtaccgatattgtcagcgatgaggtggaagagattaac
atcgaagacctcatcaaaaaagagcagatggtagtgctggtttccaaccttggctacatc
aagcgggtgccggttaccgcctacaagcggcagaaccgcggcggcaagggttccaattcg
gcagccttggttgaagatgactttatcgaccagattttcactgcttccacgcacgactac
atcatgtttatcactaatgaggggaaggcatactgggttaaggtacacgaaatccccgaa
gcgagccgtacaagccgcggttctcatatcaagtcgctgctcgccgtatcttccgacgag
gaaattaccacgattgtatccttaaaagagtttagtagcgacacatacctactgatggcg
acggcgggcggcattgtgaagaaagtgcagaccgatagcttccaaaatgccaaaacgcgc
ggtattatcgccattaagctcgatgaaggggataagctcgtgagtgcaatccttaccacc
ggtaaagatgagctaatgctggtaacccggcacggacaggcgctccgcgtttccgaaacc
gaaatacgcgaccaaggccgcgcttcgcatggggtaatcggtattcggttgtccggcggg
gatgagctgaccggcgcgcttcggattaacggcggtaagctcctcgtgatgagcgagaac
ggctacggcaagcgggttgatttttccgagttttctccgcatgggcgcggtacaggcggg
caaaaggtgtacaccattaccgaaaaaaccggcgaagtggtcggattgcttgccgtcgct
gacgatgacgaaattgtctgcatcaccggacagggaaagaccatccgcgtgcaggtttct
tctattaatgtgatgggacgcgccgcgcagggtgttaaaattctcgatatcgaaagcccc
gaccagctcatcgggttggatgtggttgcacgcgaggatgaagaagacatcgcgccgccc
gcttcggaaacaaccttcaacggagagcttgacctcgacggaggggatgtttag
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