Treponema sp. OMZ 838: JO41_03365
Help
Entry
JO41_03365 CDS
T03454
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
trm
Treponema sp. OMZ 838
Pathway
trm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JO41_03365
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
trm01007
]
JO41_03365
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trm03016
]
JO41_03365
Enzymes [BR:
trm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JO41_03365
Amino acid related enzymes [BR:
trm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
JO41_03365
Transfer RNA biogenesis [BR:
trm03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JO41_03365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1e
tRNA-synt_1g
Anticodon_2
tRNA-synt_1
Cas12f1-like_TNB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AIW88958
LinkDB
All DBs
Position
complement(730494..732095)
Genome browser
AA seq
533 aa
AA seq
DB search
MSKEQNNQKLVHWADQTAEKIIRERGDLESYTCASGITPSGTVHIGNFREIISVDLVVRA
LRDRGKKVRFIYSWDDYDVFRKVPENMPGKETLQNYLRYPITMVPDTTGRDTSYARHHEV
DVEQVLPKVGIHPEFLYQAERYRSGMYAEGMKKALQNRDKIKDCLNRYRDDEHKIPATEE
YWPVAAFCCNCSKDTTEIVSYDGEYGLEYRCTSCGHQEKADLRTSKELKLGWRVDWPMRW
QFEKTVFEPAGKDHHSQGGSFDTARLVADEVYDWPAPVSFRYDFIGIKGLPGKMSSSKGK
VISLSDVLNVYQPEIARYLFAGTRPNTEFSISFDLDVIKTYEDYDKTERIAWGVDKAKND
EVYAKERRIYELSQVEGMPSCISYQIPFRHLCNLLQINAGDIAAVMKLLPDMKEEQRERF
EARAKCAWYWITECAPEDFRFALRTDGGKAELSTSETAALCKIRDELLPQMDALDEKAFS
TALYDVAHACEIEPKALFTAVYQALIGKDQGPRLAGFMKIIGKERLAQLLSFY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaacaaaacaatcagaaattagtacattgggcggatcaaaccgcagagaag
attatacgcgaacgcggtgatttggaatcatatacgtgcgcttcgggaattacgccgtcg
ggaaccgttcacatcggcaacttccgggaaattatctcggttgatttagttgtacgcgcg
ttacgcgaccgcggtaaaaaggtacgctttatttattcatgggacgattacgatgtgttc
cgcaaagtgcctgaaaatatgcccggaaaagaaacgctgcaaaactatctgcggtatccc
atcacaatggtacccgacacaaccggccgagacacgtcttacgcgcgtcatcacgaagtg
gatgtggagcaggtgttgccgaaagtcggtattcatcccgaatttttatatcaggctgaa
cggtaccgcagcggtatgtatgccgaggggatgaaaaaagcgctgcaaaaccgtgacaaa
ataaaggactgtttgaaccgctaccgcgacgatgagcataaaattcccgcaacggaagaa
tattggcctgtcgcggctttttgctgcaattgcagtaaagatactaccgagattgtttcg
tatgacggcgaatacggattggaataccgctgcacaagctgcggccatcaggaaaaggcc
gacttacgcacctcaaaggaattaaaactcggttggagagttgactggccgatgcgctgg
cagtttgaaaagacggtttttgaacctgccggaaaagaccaccacagccaaggcggttct
ttcgacacggcgcggcttgtcgcggatgaagtatatgattggcctgctccggtcagcttc
cgctacgattttatcggcatcaagggcttgccgggtaaaatgtcctcgtcaaagggaaag
gtcatcagtctttccgatgtcttgaacgtttatcagcccgaaattgcacggtacttgttt
gcaggaacgaggccgaacacggagttttccatcagcttcgatttggacgttatcaaaacc
tatgaggattacgataaaaccgagcgtatcgcatggggtgtcgataaggctaaaaacgat
gaggtgtatgcgaaggaacgccgcatctatgaactttcgcaggttgaagggatgccgtcc
tgtatatcgtatcaaattccgttcagacacctttgtaaccttttacaaatcaatgccgga
gacatcgccgcggtcatgaagcttttgccggatatgaaggaagaacagcgggagcgtttt
gaagcacgggcgaagtgcgcatggtattggattaccgaatgtgcgccggaagacttccgg
tttgcactgcgtaccgacggcggcaaggcggaactttctacatccgaaaccgctgcactc
tgcaaaatccgcgatgagctgttaccccagatggatgcgcttgatgaaaaggctttttca
actgcgttgtatgatgtagctcatgcgtgcgaaatcgaaccgaaagcgctgtttaccgcc
gtctatcaggcgttgattgggaaagaccagggcccgcgccttgccggttttatgaagata
atcggaaaggaacggcttgcacaattgctttcattctattaa
DBGET
integrated database retrieval system
