KEGG   Treponema sp. OMZ 838: JO41_03405
Entry
JO41_03405        CDS       T03454                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
trm  Treponema sp. OMZ 838
Pathway
trm02024  Quorum sensing
trm03060  Protein export
trm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:trm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    JO41_03405
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JO41_03405
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JO41_03405
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:trm02044]
    JO41_03405
Enzymes [BR:trm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     JO41_03405
Secretion system [BR:trm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   JO41_03405
  Eukaryotic Sec-SRP protein
   JO41_03405
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 AAA_33 AAA_17 AAA_31 Zeta_toxin APS_kinase AAA_24 nSTAND3 Thymidylate_kin ResIII AAA_30 Fer4_NifH ArsA_ATPase CLP1_P NPHP3_N ParA KTI12 nSTAND_NTPase7 AAA_18 ATP_bind_1 AAA_16 AAA_28 MeaB
Other DBs
NCBI-ProteinID: AIW88966
LinkDB
Position
741357..742682
AA seq 441 aa
MLEKITNTFSGIVRKISGKATITEKNIEEAVEEIKIALLEADVNLRVVRRFINATIEEAK
GETVLKSVNPGQQFIKIVHDKILSFLGDEKKSLQLKGPDTQSVILFLGLQGSGKTTSAAK
LAARLKKEGRKPLLVACDLVRPAAVEQLSSLGERIDVPVYKEDTKDAVRVAQNAVIYARK
DGFDTVIVDTAGRLQIDEAMMQEIAAVKKAVNPVETLLVADAMTGQNAAEVAKAFDEQAG
LTGVILTKFDSDARGGAALSLKTVTGKPILYVGVGEKIEDFEPFYPDRIAGRILGMGDIV
SLVEKAQENIDAEEAARLQKKMATETFTLSDMLDQLENVEKMGSIESMLDMMPGLAGQIS
AEDIDKAGFKRQKAIIQSMTLKERENHHIIGPPRRKRIAKGSGTSVAEVNKLLKQFEKTR
QTMRKVAKSKGLQARLMGLMG
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcttgaaaaaattaccaatacgtttagcggcattgtccgcaagataagcggcaaggca
accattaccgaaaagaatattgaagaagcggtagaggaaataaaaattgcgctactcgaa
gcggatgtcaacctccgcgtggtgcgccgctttatcaatgcaacaatagaagaagcaaag
ggagaaaccgtattaaaatcggttaatcccggtcagcagtttatcaagattgtccacgat
aaaatcctgtcgtttttaggcgatgaaaagaaaagcctgcaactgaaaggccccgacacc
cagtcggttattctcttccttggtttgcagggttccggtaaaacgacatccgccgcgaaa
ctggccgcccggttaaagaaagaaggccgtaagcccctgctcgttgcctgcgacctcgtc
cgtcccgcagctgtggaacagctctcctctttaggggagcgtatcgacgtgccggtgtat
aaagaagacaccaaggatgcggtacgggttgcacaaaacgcggttatctatgcacggaaa
gacggctttgataccgttatcgtcgatacggcgggacggttgcaaatcgacgaagcgatg
atgcaggagattgctgcggtaaaaaaagcagtaaatccggtagaaaccctcctcgtcgcc
gatgcgatgacgggacaaaatgctgccgaggttgcaaaagcctttgatgaacaggcgggg
ctgaccggtgttattttaaccaagttcgactccgatgcgcgcggcggtgcggcactgtcg
ttaaaaaccgtaaccggtaagcccatcctgtatgtcggtgtcggtgaaaaaatcgaagac
tttgaaccgttctatcccgaccgtattgccggaagaattctcggtatgggtgatattgtt
tcgcttgtcgaaaaggcgcaggaaaacatcgatgcggaagaggctgcccgtttgcaaaaa
aagatggcgacggaaacctttaccctttccgacatgctcgatcagcttgaaaatgtcgaa
aagatgggctcgattgaatccatgctcgatatgatgccgggtcttgccggtcaaatttcc
gccgaggatatcgacaaagcaggctttaagcgacaaaaggcgattatccaatcaatgacg
ctcaaagagcgtgaaaatcaccacatcatcggaccgccccgccgcaagcgtattgcgaaa
ggttccggtacctccgttgccgaagtaaacaagctgttaaagcagtttgaaaagacccgt
caaacaatgcggaaggtcgcaaagagcaaggggcttcaagcgcggcttatgggactgatg
gggtaa

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