Treponema sp. OMZ 838: JO41_03975
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Entry
JO41_03975 CDS
T03454
Name
(GenBank) recombinase RarA
KO
K07478
putative ATPase
Organism
trm
Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JO41_03975
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_14
Sigma54_activat
AAA_2
nSTAND3
AAA_17
DUF4350
Mg_chelatase
AAA_33
AAA_28
Sigma54_activ_2
AAA_16
AAA_19
RNA_helicase
IstB_IS21
AAA_22
AAA_30
AAA_18
NB-ARC
ABC_tran
AAA_7
Parvo_NS1
Bac_DnaA
TIP49
NPHP3_N
AAA_25
NTPase_1
SRP54
AAA_3
NACHT
PduV-EutP
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIW89069
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Position
complement(865997..868231)
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AA seq
744 aa
AA seq
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MSNDLFEAAAAAERLPLAARMRPRSLDEYIGQEHIVGKGRLLRRAIQADRLSSVIFFGPP
GTGKTTLAQVIANHTKSNFLSLNAVLAGVQQIRDAIASAEQYKKLYGKPTILFVDEVHRW
NRAQQDALLPWVENGTVIFIGATTENPFFEVNKALVSRSRVFQLKALTDADLYRTVERCL
QDTERGYGKWKVSFTEGALEHLVETAAGDARSLLNALELAVETSTEHWPPPAGTEIIIDM
QAAEESIQQKAVLYDKDGDYHYDIISAFIKSIRGSDPDAALYWLARMVRAGESPHFIFRR
MLISACEDIGLADPHALTVVTSAAAAFDRIGLPEGRYHLTHAALYLATCPKSNSSLGFFD
ALKAVEKEQTEVPNHLKDANRDGESLGHGEGYLYPHAYRDHWIAQQYLPDELIGRVFYTP
GYTGYEEKIRNEVLAKRETQLAAIHEAAEGKKDAFTVEDWQARTEGSSAEILEQIRDTLI
GLANLSADDRVLVYRADGGLLLWPSTRITLNGCTAGIFEHQEALQSAQRYAETFEFLNRP
IMTVLPACTHPSEKTPAATQLDETPSAASEDRTLFPELAFDVVLSYNPAATADGFIAFFS
RIAQEHTAGARILFAFALPQQGLRLSALLPSDESVNRFAAAEAAFFSDSRNTRTAWTENT
IANIAEKAGYRVQLLKKVDYQEKRLVTQAELGRWFSAESEYGTAIRKAFGSEEGALEKII
QQLEQRCRKPAVYTRTVIYMSVSL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacgatttattcgaggcagcggcggcggcggaacggcttccgcttgctgcacga
atgcgcccccgcagtcttgatgaatatatcgggcaggaacatattgtcggaaaagggcgg
ttgttaaggagagccatccaagcggacaggctctcgtccgttatcttttttgggccgccg
gggacgggaaaaacaacccttgctcaagtcattgccaatcataccaaaagtaatttttta
agtttaaacgctgtccttgcaggcgtacagcagatacgcgatgcgattgcatcggcggaa
caatataaaaaactctacggaaaaccgaccattctttttgtcgatgaagtacaccgatgg
aaccgcgcacagcaggatgctttgctgccgtgggtagaaaacggaaccgttatctttatc
ggcgcgacaaccgaaaatcctttttttgaagtgaataaagccttagtgagccgcagtcgg
gtatttcagctcaaggcgctcaccgatgccgacctgtaccggactgtggaacggtgcttg
caggatacggagcggggctacggaaaatggaaggtctcttttaccgaaggcgcattagag
catcttgtcgaaaccgccgcaggtgatgcccgcagtctcttaaacgcgcttgagttagcc
gttgaaacctctaccgagcactggccgccgcctgccggtacggaaatcatcatcgacatg
caagccgctgaggaaagtatccagcaaaaagcggtgctctacgataaggacggcgattac
cattacgatatcatcagtgcctttataaaatccatccgagggagcgaccccgatgcggcg
ctctactggcttgcccgaatggtgcgggcaggggagtcccctcactttatctttcggcgt
atgcttatttccgcttgcgaggatatcggacttgccgatcctcacgcgctgaccgttgtt
acaagtgcggcggcagcctttgatcgtatcggtttgccggagggcaggtaccacctcacc
catgcagcgctgtatcttgcgacatgccctaaatcgaatagctcgctcggtttctttgac
gctctcaaggcggtagaaaaggaacaaaccgaggtgccgaaccatttgaaagatgcaaac
cgcgacggagaatcgctcgggcacggagaaggctatctgtatccccatgcctatcgcgac
cactggattgcgcagcagtatctgcccgacgaactgatcggcagggtattttacacaccc
ggatacaccggctacgaagaaaagatacggaatgaggtactggcaaagcgggaaacccag
ctggctgccatacacgaagctgccgagggaaagaaggatgcctttacggttgaggattgg
caggcacggacggaaggcagcagcgccgaaatactggagcagatacgggacacccttatc
gggctggcaaacctgtccgccgatgaccgcgtgttggtgtaccgggctgacggggggctt
ttgctgtggccgagtacccgtatcacccttaacggatgtaccgcaggaatctttgaacac
caagaagccttgcaatccgcacagcggtacgcggaaacctttgaatttttaaaccgtccg
attatgaccgtgcttccagcctgtacccaccctagtgaaaaaacacctgccgctactcag
ctcgatgaaaccccatccgctgcgtcagaggatagaacgctttttcccgagctggcgttt
gatgttgtgctttcgtataaccccgctgcgactgcggacggttttatcgctttcttttcc
cgtatcgcgcaagagcataccgccggtgcgcgtatcctcttcgcattcgcgcttccgcaa
cagggactccggctgtcggcactgctcccgtctgacgaatccgtaaatcgttttgcggct
gccgaagccgcatttttttccgacagccgaaatacacgtaccgcatggacggaaaacacc
attgcgaacatcgccgaaaaagcggggtaccgcgtacaactcttaaaaaaagtagactat
caggagaagcggctggtaacgcaggcggaactcggtcgatggttctcggcagaatccgaa
tacggcacggcaatccgcaaggcttttggttcggaggaaggtgccctcgaaaaaatcatt
cagcagctggaacagcggtgtagaaaacctgccgtgtatacccgcaccgtcatatacatg
agtgtttccctttag
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