Treponema sp. OMZ 838: JO41_06980
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Entry
JO41_06980 CDS
T03454
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
trm
Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trm03400
]
JO41_06980
DNA repair and recombination proteins [BR:
trm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JO41_06980
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GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
SLFN-g3_helicase
AAA
AAA_22
ResIII
AAA_30
TrwB_AAD_bind
Zot
AAA_19
T2SSE
FtsK_SpoIIIE
AAA_16
nSTAND3
Helitron_like_N
AAA_7
TraG-D_C
Hydrolase
AAA_6
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AIW89568
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Position
1492857..1494407
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AA seq
516 aa
AA seq
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MSEAIFLGRGETAVELLPMRANRHGLITGATGTGKTVTLKVIAEAFSDLGVPVFLPDVKG
DLCGFAEKGESSVKLQERLSLLHISNFEFKSYPVRIWSILQETGHPIRTTISEMGPLLLS
RLLDLNEVQTGVLNIAFRVADEDGLLLLDLKDLKAMLHYISENKQDLKLKYGNISDTSVG
AIQRNLLTLENEGADNFFGEPALDINDFFKQTSEGRGYINILNAVKLYQKPMLYSTFLLW
FLSELYENLPEIGDAEKPKIVFFFDEAHLLFDNGSKILLQKIEQIMRLIRSKGVAVFFVT
QNPADIPEDILGQLGNKIQHALRAFTPKDAKAIRLAAETFRVNPAFDTAQVITQLKTGEA
LVSVLQQDGSPSITQRTMIVPPHSKMGVIDSAKITALVEESPLLYKYKDPVDRESAYEIL
TKQFSEQAEAATRQAEEKQLAKENAAKAKEEAALIRAENAKARAEAAKLRLEEAAKRKNQ
STTDRLGRILVDSITRSVGREITRGVFGSVKKMLRS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcaatttttttaggccgcggcgaaactgcggttgaacttttaccgatgagg
gcgaatagacacggacttattacgggggctaccggtaccggaaagaccgttacgctcaaa
gtaattgcggaagcattcagcgatttaggcgtgccggtgtttttaccggatgtgaaaggc
gacctgtgcggttttgccgaaaaaggcgaatcgagcgttaaactgcaagagcggctcagt
ctcttacatatttcaaactttgaatttaaaagttatcccgtacggatatggagtatcttg
caagaaacgggacaccccatacgcactacgatttccgaaatgggaccgctgttgctttct
cgccttttagaccttaacgaagtgcaaaccggcgtattgaatatcgcattccgtgtcgcg
gatgaggacgggctattgcttttggatttaaaggatctgaaagcgatgctccattatatt
agtgaaaataagcaggatttaaaattaaaatacggtaatatctccgacacctcggtagga
gcaattcagcggaatcttttaacgctcgaaaatgaaggagcggataattttttcggagaa
ccggctttagacatcaatgatttttttaagcaaacatccgagggacgcggatatatcaat
atattaaatgccgtcaaactgtaccaaaagcccatgctgtattcaacctttttgctatgg
ttcttatccgagctttacgaaaacctcccggaaatcggcgatgcagaaaaaccgaaaatc
gtctttttctttgatgaagctcacttgttgtttgataacggttcaaagatattgcttcaa
aagattgaacaaattatgcgtttaatccggtcgaagggcgttgcggtttttttcgttact
caaaatcccgccgatattcccgaagacatccttggtcagctgggaaataagattcaacat
gcgttgagggcgtttacccctaaggacgcaaaagccatacgccttgcagccgagaccttc
cgcgtcaatcctgcgttcgacaccgctcaagttatcacgcagcttaaaaccggcgaagcc
ctcgtttccgttttgcagcaggacggcagcccttctataacgcagcggacaatgattgtt
cctcctcacagtaaaatgggcgtaatcgacagtgctaaaatcacagcgctggtcgaagag
tctcctcttttatataaatacaaggatccggtcgatcgggaatccgcttacgagattctt
accaaacagtttagcgaacaagccgaagccgcgacacgtcaagccgaagaaaagcaactt
gcaaaagaaaacgcagcaaaggcaaaagaagaagcggcgcttatacgagccgaaaacgcc
aaagcaagggcagaagcggcaaagttaaggctggaagaagctgcaaaacgaaaaaatcaa
agcaccacagaccggttggggagaattttggttgatagcatcacccgctcagtcggacgg
gaaattacccgcggtgttttcggctccgttaaaaaaatgctccgcagttga
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