Treponema sp. OMZ 838: JO41_06995
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Entry
JO41_06995 CDS
T03454
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
trm
Treponema sp. OMZ 838
Pathway
trm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JO41_06995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trm03400
]
JO41_06995
DNA repair and recombination proteins [BR:
trm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JO41_06995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
CCDC24
TraI_2
Phage_GPO
DS
Motif
Other DBs
NCBI-ProteinID:
AIW89571
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Position
complement(1496615..1499047)
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AA seq
810 aa
AA seq
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MTPHTLEVLEFFRIAEIIAGYCKSEEARERCLQKRPLQDAAEITAAKELGRDILSFLQAD
EPLPIRNLPPLDSVLKQLHTVGVCLTVEELYAAGLLALQVGELKAWAIKQKQTDSTACTL
IESIPPLPQTEQAVFSFIDKNGALRDIPSLTAIRKKMQRIEADIEKTMRSYCTDESTKGM
LQTPTPVLRNGRQVIAVRSNFKGRIKGIIHEYSQSGQSFYLEPESIVLRNNELMRAQAEY
EQELHRLLVSISAKLAEEAEALEQAYELVLELDCAAAAARWAYTENGVFVPDTGNAQYFY
LQAARHPLLGAAAVPIDLKLAAEDRILIITGPNTGGKTVSLKTAALFVLLNQTGWPVLAG
EETRLPVFRYVGCAIGDEQSLDRSLSTFSAYMRTVGELLEAADEESLILLDELGSGTDPQ
EGGALAMAILDELFARRSRVFVTSHHGVLKNYAYRKSGCVNASVSFDEATLRPSYRILMG
IPGESRAVDIAEKNGLSPDVIRAARAYMADSSADAAALIKGLMEKHEQLAVFEREKDETE
KALREKQRRFDLNALKLRQKEQVLRSQGYKRLNDLFEQKRNEIENLVREIQEGELTHEKT
SKLKQFFADFGQTLAEEQTDIRNEQEELSALQQALRNREQDQAHGKPANGMSATGAPVSE
ILTEGMEVLIPHLHRRGVIIRKEKKNWLVAVDTVKMTFPADKLEPLNLSGTAPLRTPQVV
VEAELHKESRPELELRLLGMRLDEAEKHLQNQLDLALMHNMQEFSIVHGKGNGVLQTMVQ
EKLAAAPYVAEFFFARPEHGGTGKTIVRLR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcatacattagaagttttagaatttttccgcattgcggagattatcgcaggt
tactgcaaatctgaggaagcacgagaacgctgtctacaaaaacggccgctgcaagatgcg
gcggagattaccgcagcaaaggagctgggacgggatatcctctcgtttttacaggctgat
gaaccgctaccgattagaaacctcccgccgctcgattccgtgttaaagcagctgcatacc
gtcggtgtttgccttaccgtagaggaactctacgcggcggggcttttggcgctgcaagtc
ggtgaattgaaggcatgggctataaagcaaaagcagacggacagtaccgcgtgtacactc
atcgaatcgataccgccgcttccgcaaaccgaacaggcggtgttttcgtttatcgacaag
aacggcgcgctgcgcgacatcccctcgctgacggctatccgaaaaaagatgcagcgtatt
gaagccgatatcgaaaaaacaatgcggagctactgcaccgacgagtctaccaagggaatg
ctgcaaacgcctacacccgtgctgcggaacggtaggcaggttatcgctgtgcgttccaac
tttaaggggcggattaagggcattatccacgaatactcccagtcggggcaaagcttctac
cttgaacctgaaagcattgtactgcgcaataacgaattgatgcgggcgcaggctgagtat
gaacaggagctgcaccgcctgttggtgagcatcagcgcaaagctcgcggaggaagcggag
gcgcttgagcaagcatacgagctcgtgttagagctggactgtgccgccgccgccgcccgc
tgggcatatacggaaaacggtgtttttgtacccgacacggggaacgctcaatacttttat
ttacaggcagcgcggcatcccctgctcggcgcggcagcggttcctatcgacctaaaactg
gcggcggaagatcggatactgattatcaccgggccaaacaccggcggtaaaacagtcagc
ttaaaaaccgccgccctctttgtgctgttaaaccaaacaggctggccggtactcgccgga
gaagaaacgcgcctaccggtgttccgctatgtcggctgcgctatcggagatgagcagtcg
ctcgaccgctcgctttcgaccttttccgcctatatgcgcactgtcggagagcttttggaa
gcagccgatgaggaaagccttatcctcctcgacgaactcggcagcggtaccgaccctcaa
gagggcggcgcgctcgctatggcgattttggatgagctgtttgcccgccgctcgcgggtc
tttgtaacgagtcatcacggtgtgctgaaaaactatgcataccggaaaagcggctgcgta
aatgcctccgtatcctttgacgaggcaacgctgcgcccttcataccggatactgatgggc
atacccggtgaaagccgcgccgtcgatattgcagaaaaaaacggattaagccccgacgtt
atccgcgccgcccgtgcgtatatggcggacagttccgccgatgccgccgccctcatcaag
gggctgatggaaaagcatgagcagcttgcggtctttgaacgggaaaaggacgagacggaa
aaagcattacgggaaaaacagcgccgcttcgatttaaacgcgctcaagctccgtcaaaag
gagcaagttctccgctcgcagggatataaacgcttgaacgatttattcgagcaaaaacgc
aacgaaatagaaaacctcgtgcgggaaattcaagaaggggagctgacgcacgaaaaaaca
agtaagctcaagcagttctttgccgatttcggacaaacgcttgcagaagagcaaacggat
atccgcaatgaacaggaggagctttccgccctacagcaggcgcttcgaaatcgtgagcag
gatcaagcacacggaaaaccggcaaacggtatgtctgcaaccggcgctccggtaagcgaa
atactgaccgaaggtatggaagtacttatccctcacctgcaccggcgcggcgtcattatc
cggaaagaaaaaaagaactggctagtggcggtcgataccgttaaaatgacattccccgcc
gataaactcgaaccgctcaacttgtccggcaccgcaccgttgcgcacgccgcaggttgtg
gtagaagcggagctgcataaggaaagccgcccggagcttgaactgcgcttactgggcatg
cggctggacgaagcggaaaaacacctgcaaaatcaactcgatcttgctttgatgcataat
atgcaggaattttcgattgtacatgggaaaggaaacggcgtgttgcaaacaatggttcaa
gaaaaactcgccgcggctccgtatgtcgcggaatttttctttgcccgccccgaacatggc
ggtaccggcaagactattgtacgcctacggtag
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