Treponema sp. OMZ 838: JO41_07265 Help Entry JO41_07265        CDS       T03454                                  Name (GenBank) YD repeat-containing protein Organism trm  Treponema sp. OMZ 838 SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TcdB_toxin_midN RHS_repeat SpvB FG-GAP_3 FG-GAP RHS Motif Other DBs NCBI-ProteinID:  AIW89615 LinkDB All DBs Position 1547486..1556737 Genome browser AA seq 3083 aa AA seqDB search MESYTDHFTDMINGTLSLPESPEPVRVNLNSIKELKAADAAGGIEGIEGLQGGSEGSAAF GIKLKVPEGVKGMAPELSLRYASGSGWGLLGKGWSLGGIESISIDTRFGLPEYNGKDTYL VEGSRVRYEGGAWIKEQEQRYERIANGWVEGRGVSENYFEVTGKDGGVKIYGKERWSGKG AGAKYIYYLDRERDSFGNEVQYVYKKETGAEGEEVLLEQVIYGKERDRKVTIAYEGRGDT RIDGRGKYVRKESKRIASIEMSVGGRAIRAYGFEYRENEMGESLLERIAVKGEGEAAGYG YEFGYEQAETDERGRIKVFGETEGWERSGSIAESVHISGGGSGSGGAGVNFGGAVSISGG MTASAGSGSGHSKRNFVDVTGDGIADIVEWKKGEIRIYEGKKRSDGKIGYERAEYFDGKA LKGLYLSENEDWNWSVGGKVDINVGIRDVNAGTGRGLTKQWSRGESKSEFTDVNRDGYVD FVSKGRYYENDRGRGFKEGVGLQGVEKVGLGVSEAEKREAEKGHYFQEGVQAWRSAVSGK VEIGVEVKEIGAGQLSVWKGTNKEGVKIGECREKKAYVFTEAVRRGEYIYFATETDNKAE IGESVKAGIRIRYSEYQRDELLGAHIAYQLPERLTVAQIDETWKRYYEADPGGSGEWKLK AGNYVTRLDEEAIEKILEKGYYTYIGSEIGKDAFEAFYNGLGTDTAKESLKKSMEYDGGF EQYVYDGQESGATLNSDVIKKMSEAEQKEAAGYKNVDGGVKYPLYYEDGKAYYRDRLTLK TNSEREKGARGYEDTEGIAVGAINGKTYRLGKEGGTLVLYEQGKRKEEAIITKEGDTVKA VVDGRNKTGYEFSIVLEGRTLGKIISEQEYEKGMGDIVERGIEYRISRVEGLSEAAYEKI KDKTVIKNAQMVAIGTLYEKAGNKRRLKESEGALVIQAIAEALKEARSGIKVIIEQREAG EVRIREVGVFTAEEKEAIGREYFEAIGSLYQIKSGIGEAERAQLEKKLKRYESEAYDFPY FTYDGAKKEYRTTKEHLEKEEVRKFLAYVESYYYEEVGVVVEYPQESRYPVRDGKIAIVK IQGGQVVTVEEEIAVYRGNENYESGKYEGTAGIEGFNRHERMYGGGKRWYYGLYSRWGEQ KFSIASLFAPNEYDESAAYKDENVAERKKQNIKESQKNGEEEKNKFAKTLKENGNEEAIG ETVKAEVMQKIQEGVTLGGYIPVQRYQTYVKKGQESEPKGEAPKKERRSGLVFSKESLIG AFASTSENGFDREGEVSSTIHYYAAYIDNEVLHSSRITGGAYKNLPWVKDGGFALSANES SSFDKTLEAHAGVSVASINASVGFNKGESKQVQSYQDIDGDGYPDIVKTSSGGLSVQYGN AEGVFQKKKGGIQGGALSTNSNESKVFGAGIGLSGSVGVIRDTEGRVKSITLEPAGSTPH GASVNEGVNYSRGWQQQTGGLVDINGDGLPDYQTAAGAKLNLGEEFRAVGAWQAVNVSEG SVKSGGGNFGIGVSAGAKANYGGGNLGVNVNISQTATESLIADINGDGLPDVLKVKEDGS YAVKLNYGAGFDGKEKTIEIRNIEGAEYAAYYNRVVADLVGTSEKIQVPYRPENMNKSTE RSEIEKLLQIPKALEFNTSQSVGVSGGLSGQIGFLVWVGIFITCNFSGGVNGTYSKSEVS LRLFDVDGDGLADRVFNIGGSDKLYVQRNKLGKVGLLKTIHLPTGGSYEIEYQRVGNTRE LPQSKYVLSSVTMNSGLQSKSGNIQSYRTTYTYKDGYYDRKAKEFYGFKTVKAVTGTGKT SETEYYIDAYYRKGMVKKETVSHNGIVYSIKEYETDEVPHARVKREWNTIREGYRSIQTE SDYRYDRYGNVTELDDKGDVSRSDDDIIARIRYWDSADERRYFKAHPERIEVLDGKSGRL LRKREGRYDNNTGAITELKQYISSGTSLTYTIDWDEKGNIKTLISPTGKKVSYRYQDGIY PVKITEEGSKGGTPYESTLLWDSALGVKLEETDSAGNTMKYRYDGFGRVTEVKSPYDTGN VPYAKYEYHTPSSSFWYTVTANKLTTKATDKAVMKTIVMHDGLGRALYTAKEGEVYREGT AGETNVGWNISGATYYDEAGRKIKEGMPFFYGGDLPNELANKAVYASVEQFYELNDFTKL RNETVYTYDGIDRVIKTLLPDGSEQKNEYAIENSLQVTTATDPLENKSVTKKDARGNIRE VERRDKANNILTKGRYEYSVLGEMLRAYDANENIVSVTYDLLGRKVALESKDTGRKEWRY DSKGLLEAESDSLLRSKLSEIQYVYDGFDRLIKIDYPFSEDVTYEYGEAGQVGAGEIIRK KDESGEIRYKYGKLSEVVEETRTIKRYEALSEPETATFTYRSDYLGRMQTMKYPDGETIT YTYDKGGQLKGVSGVKNTVKGSETYSYIDTIVYDEHGQRVYIKYGNGVETRYRYDDKRRW LKDIETRNKQTDEVFQKITYSFDKVGNVLGYSNDASVYETSQSYSYDNLYQLIGVEGTSN QYKAIKSFGSTPVNVAKYKQDFAFDGIGNMTKKSSTTNLPGARGNAYPKAELDYSLDYEY DPAYAHRLVHAGNRYYRYDANGNITAEKDGPFTEDDEFIFTYSYDPDTDVYGADYGFGLD APKETEETRPENLFAYRRNYTWNEKNQLTKSSDRTYTVHYRYGEDGQRALKYTEEGRSET LYFNNFYTIHIPVQDKNNPQGLRVHKHIFVGNSRLVTAMTHTDNNGDNAEQREKRYYYHS DHLGSAQFVTDWRGKQYEHIEYTPYGELWIEEVAAGLDKLPFRFTGKEMDEETGLYYYGA RYLDPKYSRWLSGDPALGDYVPAAGTDPSKLAGMGGVYNTVNLHLYHYAGNNPVKFLDPT GLYDEENGYTKQEIKDFKNMSVKDQLAYLKSEVGSVKKGTTAAGAKAGFMRTQLKNNMKL HGLFFSMSGDEKFMNEDLRSFLNLNSEGKNEYSRADMEKGGWFQMIPYLGDNEHQRNQNG GRNVKFCNTDGREAIFDAQDNYIGTEIDSSTYNYGYVSRFNPICITLGSTHGQYDMKPFF RQTGTKPFYWSMSVGSNYGFNSR NT seq 9252 nt NT seq  +upstreamnt  +downstreamnt atcgaatcgtatacggatcattttacggatatgatcaacgggacattgagtttaccggag agccctgaaccggtgcgtgtgaacttaaacagcatcaaggaattaaaagcggcggatgcg gcaggcgggatagagggaatagaaggattacaagggggaagtgaaggaagcgcggcgttc ggtataaagctcaaagtaccggaaggagtgaaagggatggcacctgagctgtcgttacgc tatgcgagcggaagcggctggggactattagggaagggatggagtttaggaggaatagaa agcataagcatcgacacgcggtttggcttacctgagtataacgggaaggatacgtaccta gtggaaggcagccgtgtgaggtatgaagggggagcgtggataaaggagcaggagcagcgg tatgaacggatagcaaacggctgggtcgaagggagaggagtaagtgaaaattactttgag gtaacgggaaaagacggaggggtaaagatatacgggaaagaaaggtggagcggcaaagga gcaggtgcaaaatatatttattatttggatcgggagagagacagcttcggaaacgaggta cagtatgtgtacaagaaggaaaccggagcagagggtgaagaggtacttcttgaacaggtt atctacggaaaagagagagatcgaaaggtaaccatagcgtatgaaggaagaggagatacg cggatagacggacggggaaagtatgtgaggaaagagagtaagcggatagcgagcatcgag atgagcgtcggtgggcgggcgataagagcatacggctttgaatatagagagaatgagatg ggagagagccttcttgaaaggatagcagtgaagggagaaggagaagcagcggggtatggg tatgaattcgggtatgagcaagcagagacggatgagaggggaaggataaaagtattcgga gagacggaagggtgggaaagaagcgggagcatagcggaaagcgtacacataagcggagga ggaagcggcagcggaggagcgggagtgaactttggaggcgccgtgtcgatatcgggaggc atgaccgcttctgccggaagcgggagtgggcatagtaagcggaattttgtggatgtaact ggagacgggatagcggacattgtggagtggaagaaaggggaaataaggatatatgaaggg aaaaaacgcagcgacggaaagataggatatgagagggctgagtactttgacgggaaggct ttaaaggggctttatttaagtgagaatgaggattggaactggagcgtcggcgggaaggta gacatcaatgttggaatcagggatgtaaatgccggaacgggtaggggattaacgaagcag tggagccgcggggagagcaaaagcgaatttacggatgtgaatcgggacggatatgtggat tttgtgtcgaagggaagatactacgaaaacgataggggaaggggctttaaagaaggagtc ggtttacagggagtggagaaagtagggctgggggttagtgaagcagagaagagggaagcg gaaaaagggcattattttcaagaaggggtacaagcgtggcggagtgcggtcagcgggaaa gttgagataggagtagaagtaaaagaaataggggcaggacagttaagcgtgtggaagggg acgaataaagaaggagtgaagatcggagaatgcagggaaaagaaggcgtatgtttttaca gaagcggtgagacggggcgaatatatttattttgcgacggaaacggataacaaggcagaa atcggagagagcgtcaaagcggggatacggatacggtacagcgaataccaaagagatgag ttactgggagcgcatatagcgtaccagctgcctgaaaggctcactgttgcgcagattgat gaaacatggaaaagatactatgaagcagatcccgggggaagcggggagtggaaacttaaa gcggggaattacgttacgcggcttgatgaggaagcgatagaaaagatactggaaaaaggg tattacacatacatcggcagtgagataggaaaagatgcctttgaagcattttataacgga ctgggaacagatactgcaaaagaaagcctaaaaaagagtatggaatacgacgggggcttt gaacagtatgtgtacgacgggcaagagagcggcgctacactgaacagtgatgtaatcaaa aagatgagtgaagccgagcaaaaagaagcggcagggtataaaaacgttgacggaggcgtg aagtacccgctgtattatgaggatgggaaagcctactaccgcgataggctgaccttgaaa acgaatagcgagcgggaaaaaggagcgcgaggttacgaagatacggaagggatagcagta ggagcaatcaacgggaagacgtaccggctgggcaaggaaggaggaacgcttgttctgtat gagcagggaaagagaaaagaagaagcgattataacgaaagagggtgatacggtaaaggcg gtagtggatgggcggaataaaacagggtatgagttttcgattgtgcttgaggggagaaca ctcgggaagataatcagtgagcaagaatatgagaaagggatgggcgatattgtcgagcgc ggtatcgaatatcgtatcagccgggtagaaggcttgagtgaagctgcgtatgagaagata aaggataaaacagttatcaaaaacgcccaaatggttgcgatcggaacgctgtatgagaaa gcgggaaataagcggcggctaaaggaaagtgaaggagccctcgttatacaagcgatagca gaggcgttaaaagaagcgcggagcgggattaaagttattatcgagcagagagaagcagga gaggtacggatacgggaggttggggtattcacagcggaagagaaagaggcaattggaaga gagtattttgaagcgattggaagcttgtatcaaataaagagcgggataggagaagctgaa cgtgcgcagctagagaagaagctgaagcggtatgaaagtgaggcgtatgattttccatac tttacgtatgatggggcaaagaaagaataccggacaacaaaagagcaccttgagaaagaa gaagtgaggaagtttttagcgtatgtagaaagctattattacgaggaagtgggggtggta gtagagtacccgcaggagagccggtatccggtacgagacgggaagatagcaatagtgaag atacaaggggggcaggtcgtaacagtcgaggaagagatagctgtgtaccgaggaaatgag aactatgaaagcgggaagtatgaagggactgccggcatagaaggctttaaccggcatgag cggatgtatggcggagggaagcggtggtattacggactgtattcgaggtggggggaacaa aagttcagtattgcttctctttttgcaccgaatgagtatgatgaaagcgcggcctataaa gacgagaatgttgctgaacgaaagaagcaaaatattaaagagagccagaaaaatggtgaa gaagagaaaaataagtttgccaagacgctgaaagagaatggaaacgaggaagcgattgga gagacggtaaaagcagaagtaatgcagaagatacaggaaggggtgacactgggcgggtat attccggtgcagagatatcaaacatacgtaaagaaaggtcaggagagcgaaccgaaagga gaagcgccgaagaaggaaaggagaagcggacttgttttttcaaaagaaagccttatcgga gcgtttgcgagcacgagtgaaaacggttttgatagagagggagaagtttcgagcaccatt cattactatgcagcgtatattgataatgaagtgctgcactcaagccggatcaccgggggg gcatacaaaaacctgccgtgggtaaaggacggaggctttgccctttccgcgaacgagagc agtagttttgataaaacactcgaagcacacgcgggtgtgtcagtcgcatcgatcaatgcc agtgtcggttttaataagggagaaagtaagcaggtacaaagctatcaagacatcgatggg gatgggtaccctgatatagtaaaaacaagcagcggaggcctgagcgtccagtacgggaat gcagaaggagtctttcagaagaagaaaggaggtatacagggaggagcactgtcgactaat agtaatgaatcgaaagtatttggagcgggtatagggctttcaggatcggtcggggtaatc agagatactgaagggagagttaaaagcattacactggaaccggccggttcgacaccgcat ggcgcgagtgtgaatgagggagtaaactattccagaggctggcagcagcagacaggtgga ttagtagacataaacggagatgggctacccgattaccaaacggcagcaggagcgaagcta aaccttggagaagaatttagagcggtaggggcgtggcaggcagtgaacgtatcggaagga agcgttaaaagcggcgggggaaacttcggcataggagtgagtgccggggcgaaggcgaat tatggcggaggaaacctaggggtcaacgtgaatatcagccagacggccacagaatccctt atagcagacatcaacggagacgggttaccggacgtattaaaagtaaaggaagacggcagc tatgccgtcaaactgaactatggagcaggctttgacgggaaagaaaagacaatagagata cggaatatcgaaggggcagagtacgctgcgtattataaccgtgtagtggcggatcttgtg gggacatccgagaagatacaggtaccgtaccggccggaaaatatgaataagagtaccgaa agaagtgaaatagaaaagttattacagataccgaaagcattggagtttaacacaagccaa agtgtgggagtctccggaggattatcgggacagatagggtttcttgtgtgggtagggatt tttattacctgtaacttttcaggtggagtgaatggaacctatagcaaaagcgaagtgagc ttacgcctctttgacgtagacggggacggcctcgccgacagggtcttcaacatcggaggc tccgataagctgtatgtacagcggaacaagttagggaaagtaggactattaaaaacgata caccttccgaccggcggcagctatgagatagagtatcaaagagtagggaacacacgggag ctgccgcagagtaagtatgtgctaagcagcgtcacaatgaactcagggctgcagagtaag agcggaaacatacaatcgtaccgcacaacctacacctacaaagacggctactatgaccgc aaagcaaaagagttctacgggtttaagacggtaaaagcagtaacgggaacgggaaagacg agcgagacggagtattacattgatgcctattaccgcaaagggatggtaaaaaaagagacg gtcagccataacggcatcgtttattcgataaaagagtatgaaacggatgaagtcccccat gcacgggtaaagcgagagtggaacaccatacgggaaggataccggtcgatacaaacggaa agcgattatcgctatgatcgatacggtaacgttacggagctggacgacaagggagacgtc agtagaagcgacgacgacatcattgcccgaatacggtattgggacagtgccgatgagcgg cgctactttaaagcgcaccccgaacggatagaagtgctggacggcaagagcggcaggtta ttgcggaaacgcgaaggacgctacgataataacaccggtgcgataacggaactaaagcaa tacatctcaagcggcacgagtcttacctacacgatagactgggatgagaagggaaacatt aagaccctgataagtcccacaggcaagaaggtaagctaccgctaccaagatgggatatac ccggttaaaataacggaagaaggcagtaaaggcggcactccgtacgagagtacgctcctg tgggacagtgccttaggagtaaaacttgaagaaaccgacagcgcgggtaacaccatgaag taccgctacgacgggttcggccgcgtaacggaagtgaaaagcccttacgataccggaaac gtaccttacgcaaagtacgagtaccataccccttcatcttctttctggtacacggtaacg gcaaataagctgactaccaaagcaacggacaaagccgtgatgaaaacgatagtcatgcac gacggcttaggccgcgccctctacaccgcgaaagaaggggaagtgtaccgagaaggaacc gccggagaaacgaatgtcggctggaatatatcaggcgcaacctactacgatgaggcggga agaaagataaaagaaggaatgccgttcttctatggcggcgatttaccgaatgaacttgcc aacaaagccgtctacgcaagcgtcgaacagttctatgagctgaacgactttaccaagctc cgcaacgaaacggtatacacctacgacggcatagaccgagtaataaaaacattgttgccg gacggaagcgaacagaaaaacgagtacgcaatagaaaacagcctacaggtaacaaccgca accgacccgcttgagaataagagcgttacgaaaaaagacgcgcgcggaaacatccgcgaa gtcgaacgaagggacaaggcaaacaacatcctcaccaaaggcagatatgaatactctgta ttgggcgaaatgcttcgcgcatacgatgcgaacgaaaacattgtctcggtaacatacgac ctgttagggagaaaagtagccttagaaagcaaagacaccggaaggaaagaatggcgctat gatagcaaaggcctccttgaagcggaatcggattcactgctgcgtagtaaactcagtgag atacagtacgtctatgacggttttgaccggcttataaagatagactacccgtttagtgaa gacgtaacctatgaatacggcgaagcagggcaagtgggtgccggagagataatccgcaaa aaagatgagagcggagagatacgctacaagtacgggaagttaagcgaagttgtagaagag acacgaacgattaagcgttacgaggcgttaagcgaaccggaaacggcaacctttacctac cgctccgactacctcggccgtatgcagaccatgaagtaccccgatggggagaccattacc tatacctacgacaaaggcggacagctcaaaggcgtaagcggtgtaaaaaacacggtaaaa ggaagtgaaacctattcctatattgatacgattgtctatgacgaacacgggcagagagtc tacatcaaatacggaaacggcgtagagacccgctaccgctatgacgacaaacggcggtgg ctgaaagacatagagacgagaaataagcaaacagacgaggtgttccagaaaatcacctat agttttgacaaagtcgggaacgtcttaggctacagcaatgacgcaagcgtgtacgagacg agccaaagttactcatacgacaacctctaccaacttatcggagtagaggggacaagcaac caatacaaagcgataaaaagctttggaagcacaccggtcaatgtcgcaaaatacaagcaa gactttgcctttgacggcatcggaaacatgacaaagaagtccagtaccacaaacctcccc ggcgcccgcggtaacgcctacccgaaagcagagcttgactacagtcttgattacgaatac gacccggcctatgcacaccggctcgtacacgccggaaaccgctactaccgctatgatgcg aacggcaacatcacggcagaaaaagacggcccctttaccgaggatgatgagtttatcttt acctacagctacgaccctgacaccgacgtatacggcgccgactacggcttcggccttgac gccccgaaggagacagaagagacgcgtcctgaaaacctatttgcataccgccgtaactac acgtggaatgagaagaatcagttaacgaagtcaagcgatcgtacgtacaccgtacactac cgctacggtgaggacgggcagcgagcgctcaagtatacagaagagggacgttctgaaacg ctctactttaataacttctacacgatacacatccccgtgcaagacaaaaacaatccgcag ggcttgcgagtgcataagcacatctttgtgggtaactcacgtcttgtaacggcaatgaca cacaccgacaacaacggagataatgcagagcaacgggagaagcgctactactaccattca gaccacttaggcagcgcgcagtttgtaaccgactggagaggtaaacaatacgagcacatc gaatacacaccttacggggaactgtggatagaagaagtagctgcggggttagacaaactg ccgttcaggtttaccggcaaggagatggatgaggagacgggcttatactattacggagcg cgctacttagacccgaagtatagtagatggttgagtggagacccggcgttgggagactac gtcccagctgcaggcactgatccgtcaaagcttgcgggaatgggcggcgtatataatacg gtcaatttacatctctatcattatgcggggaataatcctgtgaaattcctagatccgaca ggattatatgatgaagaaaacggatatacaaaacaagagataaaagattttaaaaatatg agtgtaaaagatcaattggcttatttaaaaagtgaagttggtagtgtaaaaaaaggaaca acagcagctggtgcaaaggctggatttatgcgaactcaactaaaaaataatatgaaatta catggattgttttttagtatgtctggtgatgaaaaatttatgaatgaggatttacgttca tttttgaatctgaattcagagggtaaaaatgaatattcaagagcagatatggaaaaaggt ggatggtttcaaatgattccatatctgggagataatgaacatcagcgtaatcaaaatggt ggaagaaatgtaaaattctgcaatacagatggacgtgaagctattttcgatgcacaagac aattatattggaacagaaatagattcttcaacatataattatggctatgtttcacgattt aatccaatatgtataacattaggaagtacccatggacaatatgatatgaagccgttcttc cgccaaactggtactaaaccattttattggagcatgagcgttggttctaattatggattt aattcaaggtaa

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