Treponema sp. OMZ 838: JO41_09530
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Entry
JO41_09530 CDS
T03454
Name
(GenBank) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
trm
Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trm03016
]
JO41_09530
Enzymes [BR:
trm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
JO41_09530
Transfer RNA biogenesis [BR:
trm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JO41_09530
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AIW90002
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Position
1981102..1982958
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AA seq
618 aa
AA seq
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MKKGNLVLYKNQPALITDVQADKFEITLEAGTKKVREKDIVLLHGGECRSIKAALDAAVP
AADFAEAADFFEGETPSFAELAELLWGTYTAEQSWKLWQALGASPYFICTSPVEPIGIRT
QAEIERLNQKEAEKAQAEKLRQDFIAALRTCMQGKPFTESKELYTPFFQELEALALGSSS
ASKILKDAKLEQTPEQAHDILLKTGFWPIEKNPYPARFGHSLHSSKADIPEPVFPEAPLD
LTAIPAYAIDNPGSTDPDDAVSFDGTYLWIHIANPADTIQADTQSDTDACARGATLYTPE
GAARMLGEKAVDYFALGLKPISYALSFKLLLGADGAIEEVGIHRTQLSVIRMTYEEADAQ
KDSSALAPLFAIAEKNRIRRENAGAVSIDFPEVSITLTEQDGTKRAQVQPVVQTEAAAMI
KEMMLLAGEAAARFAFQHSIPFQYISQEAPELPNKLPSGLAGEYRKRRAMRPRSVGTIPS
MHAALGLAMYGQVTSPLRRYGDLVSHRQLLNYIDGKPLTPAADLILKIAAGDVAGRACVS
AERASRQHWTLVYLLQNPDWRGTAVVLEVMGKKAHVFIPSLGYEGDMTLDIEPELNQELT
VKVRRIRLAYLQASFEQV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtaatcttgtcctctataagaatcaacctgcacttattaccgatgtgcaa
gctgataagtttgaaattacgctggaagccggcacaaagaaagttcgcgaaaaagatatt
gtgctgctccatggcggagaatgccggagtattaaagcagcgctcgatgccgcagtacct
gctgcggattttgccgaagcagcggatttctttgaaggagaaacgccgtctttcgctgag
cttgcagagctcttgtggggaacgtatacagcggagcaaagctggaagctctggcaagca
cttggcgcttcaccgtattttatctgcacttcgcctgtagagccgatcggtatccgcaca
caagcagaaatagagcggctcaatcaaaaagaggcggaaaaagcacaggccgaaaaactg
cggcaggattttatcgctgcactccgcacctgtatgcagggaaagccgtttaccgaaagc
aaagagttatacacgccgttttttcaagagcttgaggcgcttgcgctggggagttcttcc
gcttccaaaatattaaaagatgcaaaactggagcaaactcccgaacaggcgcacgatatt
ctgttaaaaacgggtttttggcctattgaaaaaaatccctatccggcacgcttcgggcat
tcgcttcattcgtcaaaggcggatattcccgagccggtgtttcccgaagcgccgctcgat
ttgacggcaattcctgcgtatgcaatcgacaatcccggcagtaccgatcccgacgatgcg
gtttcttttgacgggacatacttgtggattcacatcgcaaaccctgccgacaccattcag
gccgatacgcaaagcgataccgatgcctgcgcacgcggcgcaacgctgtacacgccggaa
ggagctgcccgaatgctcggcgaaaaagcggttgactattttgccctcgggttaaagccg
atatcttatgcgctttcctttaagctgctcctcggcgctgacggtgcaatcgaagaagta
ggtatccaccgcactcagctttcggttatcaggatgacgtatgaagaagcggatgctcaa
aaagactcgtccgcattagcgccgctttttgccatagcggagaaaaaccgcatcaggcgg
gaaaatgcaggcgccgtatccatcgattttcccgaagtatcgattacgctgacggagcag
gacggcacaaaacgggcgcaggttcagcctgttgtccagaccgaagccgccgcaatgatt
aaagagatgatgctgcttgcaggagaggcagcagcccgttttgcctttcagcatagtatt
ccgtttcagtatatcagtcaggaggcacccgaattgccgaataagctgccgtccggcctt
gccggggaataccggaagcggcgcgccatgcgtccgcgcagcgtgggcaccattccgtcg
atgcacgctgcgctcgggcttgcgatgtacggacaggtaacaagcccgctccgccgttat
ggagatttagtcagtcatcgccagctgttaaactatattgacggtaaaccgctgacgcct
gcggcggatctcatccttaaaatagcggcgggggacgtggcggggcgcgcctgtgtttct
gcggaacgggcatcccgtcagcattggacgctcgtgtacttgctgcaaaaccccgattgg
cgcggtacggcagtggtactcgaagtaatgggcaaaaaagcccatgtctttattccttca
cttggatatgaaggcgacatgaccttggacatcgagccggaacttaatcaggaactgacc
gtaaaggtacgccgtatccgtcttgcctatctgcaagcttcgtttgaacaggtatga
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