Treponema sp. OMZ 838: JO41_10915
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Entry
JO41_10915 CDS
T03454
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
trm
Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trm03009
]
JO41_10915
Enzymes [BR:
trm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
JO41_10915
Ribosome biogenesis [BR:
trm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JO41_10915
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3255
Motif
Other DBs
NCBI-ProteinID:
AIW90249
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Position
2298817..2299803
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AA seq
328 aa
AA seq
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MNKVFELTVPDGTGKLRLDAFCSSVLTGMTRSQLKTGMQAVQLNGRQAKLSSTVQAGDRI
TLIWENPLPDVLIPEHIPLRIVYEDNDVIVVNKRAGMVTHPAAGNWTGTLVQALAYYRLH
TSPIHDEYARLLEAEQGKGRFAELLRAGIVHRLDKDTSGILITARSAEAEAFFKNEFKLR
RTEKYYIAILNGIPEKPAGIIETSVFRDGHSRIRFAASADLSKGKYARSRYKVLRVYGRY
ALVLFKIDTGRTHQIRLHARFIGCPVVGDPLYGKKETEWKAYGLMLHAYRLCVNLPSTQK
KAVFTAPLPRKFQTVLRFLQMRQSQGNS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtatttgagcttacagtgccggatggaaccggcaagctgaggcttgatgcg
ttttgcagcagcgtgcttaccggtatgacccgttcgcagctgaaaacggggatgcaagct
gtgcagctcaacgggcggcaggcaaaactttcaagtacggtgcaagcgggcgaccgtatt
acactgatatgggaaaatccgctccccgatgttcttatacctgaacacattccgctccgt
attgtatatgaagataatgatgtcatcgtggtgaataaacgagccggtatggttacgcat
cctgcggcgggcaactggacggggacgctggtacaggcgcttgcgtattaccgcttgcac
acgtcgcccattcatgatgaatatgcccgcctgctcgaagcggagcaggggaaggggcgc
tttgccgagctattgcgtgcaggtatcgttcaccggcttgataaggatacttccggcatc
cttatcaccgcccgtagtgccgaagcggaagctttttttaaaaacgagtttaagctgcgg
cgcacggaaaaatattatatcgcaattctgaacggcataccggaaaagccggccggcatt
atcgaaacgtcggtattccgcgacgggcatagccgcattcggtttgccgcctcggcagat
ctgtctaagggaaaatatgcccgctcacgctataaagtgctgcgggtgtatgggcggtat
gcgctggtgctctttaaaatcgataccggcagaactcatcaaattcggcttcatgcgcgg
tttatcggctgtccggtggtcggagatccgctgtatggaaaaaaagaaaccgaatggaag
gcatacgggttgatgctccacgcctatcgcctgtgcgttaatcttccttcaacacagaaa
aaagccgtgtttaccgccccgctgccccgaaaattccaaactgttctgcgctttttgcag
atgcggcagtcacaggggaatagctga
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