Treponema sp. OMZ 838: JO41_12640
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Entry
JO41_12640 CDS
T03454
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
trm
Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:
trm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trm03016
]
JO41_12640
Enzymes [BR:
trm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JO41_12640
Transfer RNA biogenesis [BR:
trm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JO41_12640
Prokaryotic type
JO41_12640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIW90561
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All DBs
Position
complement(2672053..2672880)
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AA seq
275 aa
AA seq
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MTTTDSALLQRNILLRISYDGTHFHGWQKQLHHGKESFRTVQGEIERALALLHKHPVELF
GSGRTDAGVHACGQAAHFFTDIARIKPESFIPALNSALPKDVRIMEASHVSDNLHARFSA
RSRTYRYFIHCGKTAFAHQLPYCWHIRREPDINLLNKMASVLSGELDCTTFSAAGDQSKS
KSRSIYTARFFTDREFLVFEISANAFLWRMVRSITGTLLHYEQQNGTKEDFEVVLRSKDR
RNAGETAPPQGLFLWSIDYPQQLLKANEANSFCTS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgactgattcggctcttctccagcgtaatattctgctccgtatctcatacgac
ggcacacacttccatggatggcaaaaacagctgcatcacggaaaagaatcgttccgtacc
gtacagggagaaattgagcgggcgctggcactgttgcataaacaccctgtggaacttttc
ggttcgggaagaaccgatgccggtgtccacgcgtgcggacaggcagctcacttttttacc
gatatagcgcggataaagccggagagttttattcctgcgctcaattctgcgttgcccaag
gatgtacggattatggaagcgtctcatgtttctgataacctgcacgcccgtttcagtgcc
cgctcgcgcacataccggtattttattcactgtgggaaaaccgcctttgcacaccaatta
ccctattgctggcacatacggcgcgaaccggatattaacctgcttaacaagatggcaagc
gtcttgtcgggtgaattggactgtacaacgttctctgctgccggtgaccagagtaaaagc
aaatcgcgctctatctataccgctcgattttttaccgacagggaatttctcgtgtttgaa
atttccgccaatgcttttttgtggcgtatggtacgctcgataaccggaactttgctgcat
tatgaacagcagaacggcacaaaagaagattttgaggttgtgctccgctcaaaagaccgc
cggaatgcaggagaaaccgcccctccgcaggggctctttttatggtcgattgattatcct
cagcagttgctcaaggcaaacgaagcgaactctttttgtacctcataa
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