Trichomycterus rosablanca: 134300052
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Entry
134300052 CDS
T09921
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134300052 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134300052 (tbl3)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134300052 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Utp13
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD40_RFWD3
WD40_like
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
WD_LRWD1
RPN2_N
Motif
Other DBs
NCBI-GeneID:
134300052
NCBI-ProteinID:
XP_062840755
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Position
22:complement(15268053..15291369)
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AA seq
915 aa
AA seq
DB search
MAVNTLRFKTNYAVSSKIEPFYKGGKVQISHDEQYIFCTCGPRVNILQISTGKIVHSIEQ
DDQEDITSFSLSPDDEMLVTASRALLLKQWDWKQEKCTRSWRAIHNVPVASMTFDSTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVQFHPDISLLQLFSSSVDCGIRIWDLR
TSKCICVLESHFSAVTSLAFSSSGDTLVSSGRDKVCTVWDLKQRKVKRTVPVYEAVEGVV
ILPENEDYSELGAESKELHFVTAGSKGMLRVWESSSARCVFTQTLPNAPGSRSEEEDGDP
LSLLYCLFLPLSNRLATVTAEHNILLYQLPSLSVQQQFVGYNDEILDVRFLGKENSHIVV
ATNSSQLKVFELATNSCQILYGHTDIVLSLDVFKKRSMFASCAKDNSVRVWKMDTETGHV
HCMAQGHGHSNAVGSISCSRLKKAFLVSGSQDCTVKVWDLPDVFPDEGDEPVQLDARITE
KAHDKDINSVAVSPNDKLLASGSQDRTAKLWSLTDMSLVGVFRGHRRGIWCVQFSTVDQV
LATASADGTIKLWGLHDFSCLKTFEGHDASVLKVIFVSRGTQIVSGGSDGLVKLWTIKSN
ECVQTFDAHQDKVWALHCNTSDDLIVTGSADSNITLWKDVTEEEQAEEQAKQEDQILKQQ
ELSNLLHEKNFLKALGIAISLDQPHTVLRVIKEIQQEEEGTGQLKITVLRLRQDQKEALL
RYCVVWNTNARSCLHSQAVLQVLLTHLSPEELLQFQGARTHLEGLIPYTERHMQRIGRLL
QSSMFLDYMWRKVRVTGGRDSGAPQEEMDTSPQDLFIIDNKPTQDKSSQQQDDKEDHDSQ
DVEGLDSSEETPEYDDSISAWKTASFKKGRGVNGVKTRAQDSSGESSAEEDDDPVSAFPS
TKAAVSSNRILTKAR
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaatacgttgcggttcaaaacaaactatgctgtctcgagcaaaattgagcca
ttctacaagggaggaaaagtgcagataagtcacgatgaacagtacatcttctgcacctgt
ggaccacgagtcaacattctgcaaatttccacaggcaaaatagttcacagtattgagcag
gatgatcaagaggatattacatcattttctctcagtcctgatgatgagatgctggtgact
gctagcagagctttgctgctgaagcagtgggactggaaacaagagaagtgcacccgctca
tggagggccatccacaatgtccctgtggccagcatgacttttgactccacctctactctg
ctagcaacaggtggttgtgacggcactataaagctgtgggatgtagtcaaacagtactgc
acacacaacctgaaaggctcatctggtgttgttcatttggttcagtttcatccagacatc
agcctcctgcagcttttctcctcctcggtggactgtggaatccgcatatgggaccttcgc
accagcaagtgcatctgtgtacttgaaagccacttcagcgccgtgacttcgctggccttt
tcctccagtggtgataccctggtcagttctgggcgagacaaagtctgcacagtgtgggac
ctaaagcaaagaaaagtgaagagaactgttcctgtgtatgaggctgttgagggagtggtc
attcttccagagaatgaggattattctgagctcggggcagaaagcaaagagctacacttc
gtcacagctggcagcaaaggcatgctgagggtgtgggagtccagctctgcccggtgtgtg
tttacacagacgctacccaatgctccagggtccagatcggaagaggaagacggggatcct
ctcagtctgctctactgcctgtttctgcctctgtctaaccgcctggctacggtcaccgcc
gaacacaacatcctgctataccagctaccctcactcagtgtccagcagcagtttgtgggc
tacaacgatgagatcctggacgtgaggttcctgggaaaggaaaacagccacatcgtagtg
gccaccaacagctcacagcttaaggtgtttgaactggccaccaacagctgccaaattctg
tacggacacacagatattgttctctctctagatgtgttcaaaaaaaggtccatgtttgca
agttgtgccaaggataattctgtgcgtgtgtggaagatggacactgaaactggtcacgtt
cactgcatggctcagggtcatggccactccaacgctgtgggctccatttcctgctccagg
ttaaaaaaggccttcctggtctcaggcagtcaggactgcactgttaaagtctgggatctg
ccagatgtttttcctgatgaaggtgatgagccggtccagctcgatgctcggatcactgag
aaagctcacgacaaggatataaacagcgtggccgtttcaccgaacgataagcttctagca
tcaggttctcaggaccgcacggccaagctgtggtctctgacagacatgagcctggtcgga
gtgttccgcggtcaccgccgaggtatttggtgtgtccagttctccacagtggaccaagtg
ctggccaccgcttcggccgatggtacgatcaagctctggggccttcacgacttcagctgc
ctcaagacgttcgaaggtcacgatgcatctgtgctgaaggttatattcgtcagtcgaggg
actcagatcgtttctggtggttctgatggtcttgtgaagctctggacgattaaatccaac
gagtgtgtgcagacttttgacgctcaccaggacaaagtgtgggcactgcattgcaacacc
agcgatgacctcatagtgacaggatctgccgactccaacattacgctgtggaaggatgtc
acagaggaggagcaagctgaggagcaggcaaaacaggaggatcagatactaaagcagcag
gaattgtccaacctacttcatgagaaaaacttcctcaaggctttgggcatcgccatctca
ttggaccagccacacactgttctccgcgtcatcaaagagatccagcaggaggaagagggc
acagggcagctgaagataactgtccttaggttgcggcaggaccagaaggaggctctgctt
cgatactgtgtggtgtggaacacgaatgcccggagctgtttacattcccaggcggtgctg
caggtgcttctgacccaccttagtccagaagagctgctgcaattccagggtgcacgcact
catctagaggggctcatcccgtacaccgaaagacacatgcagaggatcggacgactgctc
cagagttccatgttcctggattacatgtggagaaaggtgcgagtgactggaggaagagac
agtggggcaccacaggaggagatggacaccagccctcaggacttattcatcatagacaac
aaacccacacaggacaagtcgagtcagcagcaggatgacaaagaggatcacgacagccag
gacgtggagggactcgacagcagtgaagaaacacccgagtacgatgacagtatcagtgcc
tggaaaactgccagctttaaaaagggcaggggggtcaacggggtcaaaaccagagcccag
gattccagcggagaaagctcggccgaggaagacgacgatccggtttccgcatttccttct
actaaagctgcggtatcgtccaaccgcattctgacaaaggcgaggtaa
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