Trichomycterus rosablanca: 134300298
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Entry
134300298 CDS
T09921
Symbol
hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
trn04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134300298 (hcrt)
04081 Hormone signaling
134300298 (hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
trn04052
]
134300298 (hcrt)
Cytokines and neuropeptides [BR:
trn04052
]
Neuropeptides
GPCR binding
134300298 (hcrt)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
134300298
NCBI-ProteinID:
XP_062841088
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All DBs
Position
22:complement(4442186..4444153)
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AA seq
167 aa
AA seq
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MPRGVIRLMDISSVKYSTVVLLKTFNLSCSRQQKLQILLSLVLLAHLICDTEAGSSCCAR
KPRPCTLYELLCRAGQGNDTGSAGKTGRITSDASAGILTMGKRKENDSRYHDRLQQLLQS
SRNQAKGILTVGKRTEDGVATLHRPVKLDLEQPLKYLMQPVDRDLNR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaggagtgatcagactcatggacatctcatcagtcaagtacagtacagtggta
ttgctaaaaacttttaatctttcttgttcacgtcagcagaagctacaaatcctgctctcg
ttggtgttactggctcacctgatttgtgacaccgaggccgggtcgagctgctgcgctcgt
aaaccacgaccatgtaccctgtacgagttactgtgtcgtgcgggtcaggggaacgacacg
ggctcagcgggaaaaacaggccgcataaccagcgacgcttctgctggcatcctgacgatg
ggcaagcgcaaggaaaacgacagccgataccatgaccgactgcagcaacttctgcaaagt
tcacgaaaccaagctaaaggaatcctaacggtggggaaaagaaccgaagatggagtcgct
acccttcacagaccagttaaacttgaccttgaacaaccgctcaaatatctgatgcaacct
gtggatcgagacttaaacagatga
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