Trichomycterus rosablanca: 134300353
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Entry
134300353 CDS
T09921
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134300353 (tmc5)
03037 Cilium and associated proteins [BR:
trn03037
]
134300353 (tmc5)
Transporters [BR:
trn02000
]
Other transporters
Pores ion channels [TC:
1
]
134300353 (tmc5)
Cilium and associated proteins [BR:
trn03037
]
Other cilia and associated proteins
Stereociliary proteins
134300353 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
134300353
NCBI-ProteinID:
XP_062841142
LinkDB
All DBs
Position
22:complement(19776775..19794165)
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AA seq
734 aa
AA seq
DB search
MNRRTSLYPRQGVQLEEFGLTEEEIQEEVENDTSELVSELAKLPTRAQIQAIKALPMSFQ
ERRYIRSRVTSEKSILPTCCTDCNQQVSLCFRRFGGGVSVARQHLVIWRDALKEIGGRFG
TTVLSYFSFLKWLLMFNVFSLLINFCIITVPQIVHGANITNTVAFRGLELLTGAGYFNQT
VFFYGGYNGEVIANQPPYNMQLAYFFTTAAYLVLCGVSLIYSMARSFQKNFVLAIGPTNG
GAWRLLCSWDFSVVNEKAIQNHKNNLGIQLKETLSERLQRKAKPPVSTLLKRFSFHLLAW
LLCVGLAVGSCAAIYFLESHQSKLVTSVSGPAEDLSIEASTLIVPVVVSLINLIVPLIFS
LINKMENYTNPRTNIYMGITRNVLLKMSILAILCYYWLNDLPSTIPCWESFVGQSVYRLV
VVDFIFCLFSSFFGEFLRNIIGTKCIPSLGVPEFDVATNVLNLIYAQTLAWIGIYFSPLL
PVIQIIKLFIIFYLKRVSLSMNCQPPRRTGRAAQMQTVYVALLFFPSFVGALSMVAYTVW
RLKPSEQCGPFQGLDTPFQTVHRWMSAVHDVPGSEWAWWIFENVLRNELFFYLITLIVLV
LTYFLWQVTQGRKQLIRSLREQIVNEGKDKSFLRNRLQSIQKQRRAAAAFRSQEFAETSF
NHSWMNTFPSGYVSQSHCLKSVIITQSMYLNTDSFGHTKPCGTWRSVDKCRSLERWRNPG
VRILVLQAGKNIAV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaggacgagtttgtacccccgtcaaggtgtacagctggaagaatttgggctc
actgaagaggagatacaagaggaggttgagaatgacacgagtgaattggtgtctgagctt
gccaagctcccaaccagagctcaaatccaggcaataaaagctctgcccatgagtttccag
gagaggagatatatcaggagcagagtgacgtcagagaagagcattctcccgacgtgctgc
accgactgcaatcagcaggtctcactgtgtttccgcaggtttggcggcggcgtatccgta
gcccggcagcatttggtgatatggcgtgacgccctcaaggagatcggcggccgcttcggc
actaccgtcctgtcatacttcagcttcctgaaatggctgctcatgttcaatgtcttctca
cttctcatcaatttctgcatcatcaccgtcccacaaatcgtgcacggagcgaacataacc
aacaccgtggccttcagggggctggagctgctcacaggagccggttacttcaaccagacg
gtcttcttttatggtggttataacggtgaagtcattgcaaatcagcctccctacaacatg
cagctggcttatttcttcaccacagcagcatacttggtgctttgtggagtttctctcatc
tacagcatggccaggtccttccagaagaatttcgttctggcgattggacccactaatggc
ggggcgtggcgccttttgtgcagctgggacttcagcgtggttaatgaaaaggcgatccag
aaccacaagaacaatctcggcatccagctgaaggagactctgtctgagcggttgcagaga
aaagctaagccgccggtttccaccctactgaaacgcttctcatttcatctgctggcctgg
ctgctgtgtgtgggtctcgctgtgggctcctgtgccgccatctactttctggagtcacac
caaagcaagctggtgaccagcgtctcaggccccgccgaggatttaagcatcgaggcttcc
acgctcatcgtgccggtcgtggtgtccctgatcaacctgatcgtccctctcatcttttca
ctcatcaataaaatggagaactacaccaacccacgcaccaacatctacatgggcatcaca
cgaaatgttctgctgaagatgtccatactggcaatactctgctactactggctaaacgac
cttcccagcaccatcccatgctgggaatccttcgtgggtcagtcggtgtatcggctggtg
gtggtcgactttatcttttgcctgttcagttcgttcttcggagagttcttacgcaatata
attggaaccaaatgcatcccgagtcttggtgttcctgagttcgatgtcgccacaaatgtc
ctcaatctcatctacgcccagacattagcatggattggaatctacttctccccacttctt
cccgtcatccagatcatcaagctgtttatcatcttctacctgaaacgggtcagtctgagc
atgaactgccagccacccaggcgcacgggcagggcagctcagatgcagacggtgtacgtc
gcactgctgtttttcccctcgttcgtgggagcgctctccatggtggcctacactgtttgg
aggctgaagccttcggagcagtgtgggccattccagggcttggacacgccctttcagacc
gtccacagatggatgagcgcggtccacgacgttccgggatccgagtgggcttggtggata
tttgagaacgtgctgaggaacgagctgttcttctacctcatcacgctcattgttcttgtt
cttacttattttctctggcaagtgacccagggcaggaagcagctcatcagatctctacgt
gagcagattgtcaacgagggcaaggacaaatccttcctgcggaacagattacaaagcatc
cagaaacagagaagagccgccgccgccttcaggtcccaggaatttgcagagacctccttt
aaccacagctggatgaacacttttccctctggatatgtgagccaatcacattgtttaaag
tcagtcattattacccagagcatgtatctcaacacggactcgttcggccatacgaaacca
tgcgggacgtggcgatccgtcgataaatgcaggtcgttagagagatggagaaaccctggc
gtgcgtatcctcgtcctccaggcaggaaaaaatattgcggtttga
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