KEGG   Trichomycterus rosablanca: 134300853
Entry
134300853         CDS       T09921                                 
Symbol
stag1b
Name
(RefSeq) cohesin subunit SA-1 isoform X1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
trn  Trichomycterus rosablanca
Pathway
trn04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:trn00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    134300853 (stag1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:trn03036]
    134300853 (stag1b)
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    134300853 (stag1b)
SSDB
Motif
Pfam: HEAT_SCC3-SA STAG SCD Cnd3 LTN1_E3_ligase_6th
Other DBs
NCBI-GeneID: 134300853
NCBI-ProteinID: XP_062841358
LinkDB
Position
23:complement(16492535..16536618)
AA seq 1259 aa
MINSDFPALQDSSNESGQGETVSLSLSVSELEEHAEGKGKKKRGRPGRGAQASNKKARKS
PVEKGGRRPNGVAQQNGDGADPSTLFEVVKLGKSAMQSVVDDWIESYKQDRDLALLDLIN
FFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTIAGPQWKKFRYNFCEFI
GVLIRQCQYSIIYDDYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSI
NQDNTQRQYEAERNKVAGKRATDKLELLLEKRKELHENQDEIENMMNSIFKGIFVHRYRD
AIAEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRG
LFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEDALSNEDCENVYHLVYS
AHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSANGNLIRMLVLFFLESELHEHAA
YLVDSLWDSSQELLKDWDCMIELLLEEPVQGEEVLGDRHESALIELMVCTIRQAAEAHPP
VGRGTGKRVLTAKEKKTQIDDKNKLTEHFIIALPMLLSKYQADSEKVANLLHIPQFFDLE
VYSSGRMEKHLDALLKQIRLVVEKHTEIDVLEACSKTYSILCSEEYTIMNRVDIARSQLI
DELSDRFNHSVEDLLQEGEEADDDDIYSVLSSLKKLTAFHNAHDLTKWDFFKNCYRLLKM
GIEQGSMPEQIAVQALQCSHYSILWQLVRITEGSPSKDDLLALRRVVKSFLAVCQQCLSN
VNTPVKEQAFMLLCDLLMIFSHQLTSGSREALQPLVFNPDNTLQSELLSFVLDHVFIDQD
DENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYNDYGD
IIKETLSKTRQTDKIQCAKTLILSLQQLFNDLVQDQGPNLDRTSSHVSGIKELARRFALT
FGLDQIKTREAVATLHKDGIDFAFKFPNPKGGEYPPPNLAFLEVLCEFSSKLLRQDKKTV
HSYLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDEDRMSVTTGSTTSRASSVRSKRGRP
PLHKKRADAADESVDGSWVMRNDTIQTPGGLQTPQLTSTVLRENPRQAAEHVPDQDSSEP
GSEPDYMHNQQMQMSWLDQQKMDDVNRKERGGMNYMKARSGGVRQQVRGLMEDDAEPIFE
DVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSTAIIEDDSGFGMQMF
NT seq 3780 nt   +upstreamnt  +downstreamnt
atgattaattctgacttccctgccctgcaggactcgtctaatgagtctgggcagggagaa
acggtgagtctgagtctcagcgtcagtgagctggaagagcatgcagagggcaaaggcaag
aagaagagaggaaggccaggaagaggagctcaagcctccaacaagaaagctcgcaagtcg
ccggtagaaaagggaggcaggcgacccaacggcgtggcccagcagaacggagacggtgcc
gacccgtccacgctgttcgaggtggtcaaactcggcaagagcgccatgcagtcagttgtt
gacgactggattgaatcatacaaacaggacagagatttggctctgctggatctcatcaac
tttttcattcagtgctctggatgcaagggtaccgtaagaatcgagatgttcagaaacatg
cagaacgcagaaattatcaggaagatgaccgaagagtttgatgaggacagcggcgactac
ccgctgacgatagccggcccacagtggaagaagttccgctacaacttctgcgagttcatc
ggcgtgttaatccggcagtgtcagtacagcatcatttatgacgattacatgatggacacg
gtcatctccctcctcaccggcctctccgactcgcaggtccgagccttcagacacaccagc
accctggcagctatgaaactgatgacggcgctggtgaacgtcgcgctgaacctgagcatc
aaccaggacaacacgcagagacagtacgaagccgaacgcaacaaggtggccggaaaaaga
gccaccgacaagctggagctgcttctagagaaacggaaggagcttcacgagaaccaggat
gaaattgagaacatgatgaactccatctttaagggaattttcgtgcaccgctacagagat
gctatagctgagatcagagcgatctgcatcgaggagatcggagtgtggatgaagctttac
agcgacgcttttcttaatgacagttatctaaagtatgtgggctggacattacatgaccgg
caaggagaagtccgactaaagtgtctcaaagcgcttcagactctctataccaacagaggg
ctttttcccaagctggagctcttcactaaccgctttaaggaccgtattgtatctatgact
ctagataaagagtacgacgtagcagtggaggctattcgactggtcactctgatattacat
ggcagcgaggacgcgctctccaacgaagactgcgagaacgtctaccacctggtctattca
gcgcatcggcccgtggcagtagctgcaggagagtttctccacaggaagttgtttagtagg
catgacccacaggcagaggaggctctggctaagaggcgaggcagaaacagcgctaatggg
aacctcatcagaatgctggtgctcttttttcttgaaagtgagctgcacgaacatgccgca
tatcttgtggacagcctgtgggacagctcccaggagctactgaaggactgggactgcatg
atcgagctgcttttggaggagcctgtacagggagaagaagttctgggagacaggcatgaa
agtgctttgatcgagctcatggtgtgcaccatcagacaagcggccgaggctcacccacct
gtcggccgaggaactggaaaaagggttctcactgcaaaagagaagaaaacccagattgat
gataagaataaactgactgagcacttcattatagcacttccgatgctgctgtcaaagtat
caagcagactctgagaaggtggccaacctcttacacattccacaattctttgacctggag
gtctacagctctgggcgaatggagaagcatctggacgcgctgctgaagcagatccggctg
gtggtggaaaagcacacagaaatcgatgtactggaggcgtgcagtaagacgtacagcatt
ctgtgcagcgaggagtacaccatcatgaaccgcgtggacatcgcccgcagccaactcatc
gacgagctctctgatcgctttaaccactctgtagaggatcttctacaggagggtgaggag
gctgacgatgacgacatctacagtgtcctttcttccctcaagaaactcactgcttttcac
aatgctcatgatctcacgaaatgggacttttttaagaactgctatcgattgctgaaaatg
ggaatagaacaaggctccatgccagagcagattgctgttcaggccctgcagtgttctcat
tactccatcctgtggcagctggtgcgcattactgaaggctctccatccaaggatgacctt
cttgctttaagaagagtggtgaagtcttttctagcggtgtgccagcagtgtctctcgaat
gtgaacactccagtcaaagagcaggcgttcatgctgctgtgtgacctgttgatgatcttc
agccaccagctgacctcagggagcagagaagcactccagccgctggtcttcaacccagat
aacacgctgcagagcgagctgctgagcttcgtcctggaccacgtcttcatcgaccaggac
gacgaaaaccagagcatggagggtgacgaggaggatgaagcaaacaagatcgaggctttg
cacaagagaagaaacctgctcgctgccttcagcaagctgatcatttacgacattgtcgac
atgcctgcggccgctgacattttcaaacactatatgaagtactacaacgactatggagat
atcatcaaggaaaccctgagcaagaccagacagacagataagatccagtgtgccaaaact
cttatactcagcttgcagcagctctttaacgatctcgtgcaggatcagggccctaatttg
gaccgaacctcctcccatgtaagtggcattaaagagctggctcgccgtttcgccctgacg
tttggactcgatcagatcaaaaccagggaggcagtggcgaccctgcacaaagatgggatc
gactttgcgtttaagtttccaaacccgaaaggaggagagtatcctccacccaatctggct
tttctggaggtactgtgcgagttctcttccaaactcctgcgccaggataaaaagactgtc
cactcgtacctggagaaattcatgacggagtacatgatggagcggagggaggacgtgtgg
ctgccgctgatcgcgtacagaaactctctcctcacgggaggggacgaggaccgcatgtcc
gtcacgacgggcagcacaaccagcagagccagctcggtccgcagcaagagggggcgacca
ccgctgcacaagaaacgcgcagacgcagcggacgagagcgtggacggctcgtgggtgatg
cgtaacgacaccatccagacacccggtggcctgcagacaccacagctcacctccacagtg
cttagggagaacccgcgacaagcagcagaacacgtcccagaccaagactcgtccgaaccg
ggctccgaacccgactacatgcacaatcagcagatgcagatgtcgtggctggaccagcag
aaaatggacgacgtgaacaggaaagaacgaggcgggatgaactacatgaaggcacggagt
ggaggagtaaggcaacaagtacgtggcttaatggaagacgacgcagagcccatctttgag
gacgtaatgatgtcatcacgtggccagttagaggacatgaatgaggagtttgaggacacc
atggtgatagatctgccaccatcaagaaacagacgagagcgagctgaactcagaccggac
tttttcgactccacggcgattatagaagacgattcgggatttggtatgcaaatgttttaa

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