Trichomycterus rosablanca: 134300941
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Entry
134300941 CDS
T09921
Symbol
satb1b
Name
(RefSeq) SATB homeobox 1b isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134300941 (satb1b)
03036 Chromosome and associated proteins [BR:
trn03036
]
134300941 (satb1b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
134300941 (satb1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134300941 (satb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134300941
NCBI-ProteinID:
XP_062841491
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All DBs
Position
23:2832509..2873999
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AA seq
858 aa
AA seq
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MMDHLSEACLGKENCELVGGLNDAKGPPAKMARLEQNGSPLGRSRLGSTGAKLSGVSFKP
SSHLLKFSHKRGNLLPVFCVVEHYENPIDFECREEHAEFVLVRKDMLFNQLIEMALLSLG
YSHSSAAQAKGMIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVITLKIQLHSCPKLEDL
PPEQWTHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRW
YKHFKKTKDMIVVRQPSQLEGYLGTCVLHDSPRANTVEMDSLSDLSPPGTNHLSFSQQPI
PGSTAEQPPSPVPLTHSSQAPGRAQLPGLHPGLVSSPISPQLVNQQIVMAQILNQQYAVN
RLLAQQSLNQQYLNHPPVSRALSKPLDPQVTSNTEVSTEIYQWVRDELKRAGISQAVFAR
VAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQEERERSLTAA
SSMGPAPLISTPPSRPVQSQSVGGNQMLLSSSDPRIRISCFSDSPRREECNNIRPEDWNP
RIPVGISPASRLPAQVKPLPLASEWNGKQESSILNISSAIYDEIQQEMKRAKVSQAMFAK
VAASKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLPQLERDAIYEQESSGGQQHH
PERPTHLLHIPTEPLQPQAYPPPVSQHQPALALHHPSQPLISQQPQPQQQAGPRLPPRQP
STASPAEAEDESHQAKARPGARISMEALGILQSFLQDVGPYPDDEAVHTLSAQLDLPRHT
IIKFFQNQRFCARPMDAPGGIALPNANDQDEVGMTDFKESELLKDLDESTQTTNIFAIKI
EEHMGTERACQAEQEVKD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatctcagcgaggcatgtctggggaaggagaactgcgagctggtgggcggc
ctgaacgacgccaagggcccgccggccaagatggctcgactggaacagaacggaagcccg
ctgggacgttcgcgcctgggcagcaccggcgccaaactctcgggagtgagcttcaaacct
tcctcacaccttctcaagttctcgcacaagaggggtaacctgctgcccgtgttctgcgtg
gtggaacactacgagaacccgatcgattttgagtgccgggaggagcacgccgaatttgtg
ctggtcaggaaggacatgctcttcaaccagctgatcgagatggctctcctctcgctggga
tactcgcacagctccgccgcccaggctaaaggaatgatccaggtggggaagtggaacccc
gtacccctgtcgtacgtgacggacgcccctgacgccacagtggctgacatgctgcaggac
gtctaccatgtcataacgctgaagatccagctgcacagttgccccaaactagaggacctg
ccgcccgaacagtggacccactcgacggtgagaaacgcccttaaggagttacttaaagat
atgaaccagagctcgctggctaaagaatgccccctgtcacagagcatgatctcctccatc
gtgaacagcacctactatgcaaacgtctccgcggccaagtgtcaggaatttggacgctgg
tataaacatttcaagaagacaaaagacatgatagtcgtgcgccaaccctcccagctggag
ggctatctggggacgtgcgtcctccacgacagcccacgcgccaacacagtagaaatggac
agtctgtctgacctctctccgcccggcaccaatcacctgagcttcagtcagcagcccatc
ccgggcagcacggccgagcagcccccgtctcccgtgcccctcacccacagctcgcaggcc
ccgggtcgcgcccagcttcccggacttcaccccggcctggtctccagccccatcagccct
cagctggtcaaccaacagatcgtcatggctcagatcctgaaccagcagtacgccgtcaac
cggctcttggcgcagcagtcgctgaaccagcagtacctgaaccacccgccggtcagtcgg
gccctgagcaaacccctcgacccccaggtgacctccaacacggaagtgtccaccgagatc
taccagtgggtgagggacgagctgaagagggccgggatctcgcaggccgtgttcgcccgc
gtcgccttcaacaggacgcagggtttgctttccgagatcctcaggaaagaagaagacccc
aaaacggcgtctcagtcgctgctggtgaacctgagggccatgcagaacttcctgcagcta
cccgaggccgagagagaccgtatctatcaggaggagcgggagaggagtttaacggcggct
tcctctatgggtccggcgcccctgatcagcaccccgccatcacgtccggtccagagccag
agcgtcggagggaaccagatgctgctttccagttcggatcccaggatcaggatcagctgc
ttctccgactcgcctagaagagaagaatgcaacaacatcaggccggaggactggaaccca
aggattcctgtggggatttctcctgcatctcggcttcccgctcaggtgaagcccttaccg
ctggcgtccgagtggaacggcaagcaggagagctccatcctcaacatcagctcggccatc
tacgacgagatccagcaggagatgaagagggccaaggtgtcgcaggccatgttcgccaag
gtggccgcatccaagagtcagggctggctgtgtgagctgttacgttggaaggaggacccg
tcgccggagaaccggacgctgtgggagaacctgtccatgatccgccgcttcctcagtctc
ccacagttggagagagacgccatctacgaacaggagagcagcgggggtcagcagcaccac
ccggagcggccaacacacctgctgcacattcccaccgaacctctgcagccgcaggcttac
ccacctccagtctcccagcaccagcccgctctggctcttcatcacccatcgcagcctctc
atctcccagcagcctcaacctcagcagcaggcgggtcctcgcctcccgccacgccaaccc
tccaccgcgtcgcccgccgaggccgaagacgagtcccaccaggctaaagcgcgccccggc
gcccggatctccatggaggctctgggtatcctgcagagcttcctgcaggacgtgggtccg
tacccagacgacgaggcggttcacacgctgtcggctcagctggacctgccacgccacacc
atcatcaagttcttccagaaccagcgcttctgcgccaggcccatggacgcaccggggggc
atcgccctgcccaacgccaacgatcaggacgaggtgggcatgacggacttcaaagagagc
gagctgctcaaagacttagacgagtccacgcagaccaccaacatcttcgccatcaagatc
gaggagcacatgggcaccgagcgggcgtgccaggccgaacaagaagtgaaagattaa
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