Trichomycterus rosablanca: 134301184
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Entry
134301184 CDS
T09921
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134301184 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134301184 (pola1)
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134301184 (pola1)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
134301184 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
NSP2-B_epitope
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
134301184
NCBI-ProteinID:
XP_062841851
LinkDB
All DBs
Position
23:complement(15144157..15222535)
Genome browser
AA seq
1473 aa
AA seq
DB search
MAPVSNPEKDADGGDYDDGAACGLAASRSRREKKEKVGRKSALEQLKRAKKGEKLKYEVE
KIESVYEEVDEDQYSRMVRERQDDDWIIDDDGTGYVEDGREIFDEDLENNASAKGAKGKS
GAKGAESKDAKKKVSVSKPNSIKSMFMNSNVKKPAEKNVDLSKDDLLGDILEDLHSEKPM
LLTPPPVITLKKKKSLGSPMNPFSVKPQTPRSPAAPVSKPKPTVLRPPSTDLAPEAASKP
ASSVQPKKSKVEEPEEAAHSLDFDEVDFDEPMDLGGEQQDEVEVDVKAEPEPEVIPSVEV
EPKTEPQDEVLISGMVGGSCWGKMEEDEAEEAAVEVQVDSSQLPLVEGADGEKVFRFYWL
DAFEDQYSQPGVVYLFGKVWIESAKAHVSCCVAVKNIERTMYFLPRERKVNLATGEETND
PVGMMDVYQEFNSLSEKFKIMRFKSKKVERSYAFEIPDVPTQCEYLEVRYSAEMPQLPSD
LKGTTFSHVFGTNTSSLEHLLLSRKIRGPCWLDIKTPQLSNQPMSWCKVEAIALKSDLIT
VVKDLPLPPLVVMSISLKTVQNPKTHHNEIVSLAALIHYKFPLDKAPPRNPYQTHFCVVS
KPSDCIYPYDFKEAVRKKNGIVELAATERTLLGFFLAKMHKIDPDVLVGHDILGFDLEVL
LQRINFCKVPFWSKIGRLRRANMPKLGGRGGFAEKSAACGRLVCDVEISAKELIRCRSYN
LTELSSQILKMERTVVPPENIRNLYSDSPHLLYLLELTWMDAKLILQIMCELNVLPLALQ
ITNIAGNVMSRTLMGGRSERNEYLLLHAFNERNFIVPDKQFFKKPQQNLGEDEGLEVGKS
KSGKVRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTIQREASNSRK
KTEEDDPDEIPELPDPDLEMGVLPKEIRKLVERRRQVKQLMKQPDLNPDLYMQYDIRQKA
LKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLDVIYGDTDSIMI
NTNSSNLEEVFKLGNKVKSEVNKLYKLLELDIDGVFKSLLLLKKKKYAALVVESHGEGRY
TTKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDTILENIQQHLIEMGEKVANGSV
PLNMFEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYIICQDGSNLAA
SQRAYAPEQLQKQPGLTLDTQYYLSQQVHPVVGRICEPIEGIDTVLIATWLGLDPTQFRA
QQRQQREEESDSFVGVPAQLTDEERYRDCERFAFACPDCGTENIYDSAFEGTGSVIEPSL
RRCCQISCNGSPLRHTVRIGNRLLLDVRRHVRKYYSGWLLCEDQACGNRTRRLPIAFSRS
GPMCPVCSKSTLRPEYSEKALYNQLSFYRFIFDWEYAVAKVLQPDEKQKLKSASNEEKAA
YTKLKALLDRVLLSSSYSEVNLAKLFQAFTSLK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggtttctaatccagagaaggatgcagacggtggagattatgatgatggagct
gcatgtggactcgcagcgtcgcggtccaggcgagagaaaaaagagaaagtgggccgcaag
tctgccctggagcagctgaaaagagccaagaagggggagaagctcaaatatgaggttgag
aagatcgagagtgtatatgaggaggtggatgaggaccagtactcacggatggtcagagag
aggcaggacgacgactggatcattgacgatgatggaacgggatacgtagaggacggcaga
gagatctttgatgaagatctggaaaataatgcatccgcaaaaggagctaaaggcaaatcg
ggtgctaaaggagccgagtcgaaggatgccaagaagaaagtgtcagtcagtaaacccaac
agtatcaagagcatgttcatgaacagcaacgtcaaaaagcctgccgagaaaaatgtggac
ctgtctaaagacgacctgctgggagatattcttgaggatctacactcggagaaaccaatg
cttctcactccacctccggttattacgctgaagaaaaagaaatccctgggatcacccatg
aaccctttttctgtgaaaccccaaactcccaggtcacccgcagctccagtttccaagccc
aagcctaccgtcctgcgccccccttcgaccgatctcgcacccgaagcggcttctaaacca
gcttcctccgtccagcccaagaagtcaaaggtggaggagcctgaggaagctgctcattcg
ttagatttcgacgaggtggactttgacgagccgatggatttgggtggcgagcagcaggac
gaagtggaagtggacgttaaagccgagccggagcctgaagtcatacccagtgttgaagta
gaaccgaagaccgaacctcaggacgaagtgttgatatctggcatggtgggagggtcctgc
tgggggaaaatggaagaggacgaggctgaggaagcagccgtggaggtgcaggtggactcg
agtcagcttccattggtggaaggagctgacggagaaaaggttttccgcttttactggctg
gatgctttcgaggaccagtacagccaacctggtgtggtgtatttgttcggaaaggtgtgg
attgagtcggccaaggctcacgtcagctgttgtgtggccgtgaagaacattgagagaaca
atgtacttcttgccacgagaacgaaaagtgaacctggcgactggtgaggagacgaacgat
cctgtcggaatgatggacgtttaccaggagtttaacagcctttctgaaaagtttaaaatc
atgaggtttaagtccaagaaagtggagaggagctacgcatttgagattccagatgtgcct
acacagtgcgagtacctggaagtgcgatattctgctgagatgccccagctgccttctgat
ctgaagggtaccaccttctcccatgtcttcggcaccaacacctccagtctggagcacttg
cttctcagcaggaagatccgaggcccctgctggctcgacatcaaaaccccccagctgagc
aatcagccgatgagctggtgtaaagtggaggccatcgctctcaaaagtgacctgatcacg
gtggtgaaagacctgcctcttcctccactggtcgtcatgtccatcagcctaaagaccgtt
cagaaccccaaaactcatcacaacgagattgtgtccttggctgctttgatacattataaa
tttcctctggataaagcgcctccacggaacccttatcagacccatttctgtgtggtgagt
aagcccagcgactgcatctacccctatgacttcaaggaagccgtcagaaaaaagaatgga
attgtggagctcgcggcgaccgaacgcacactcctgggcttcttcctggctaagatgcac
aaaatcgaccctgatgttttagtgggtcatgacatcctcggttttgaccttgaagtgctg
ctgcagaggatcaacttttgtaaggtgcccttctggtccaaaataggtcgtctgaggcgt
gccaacatgcccaaactaggggggcgtggcgggtttgcagagaagagtgccgcctgtggc
cggctagtgtgtgacgtggagatttcagccaaggagctgattcgctgtaggagttacaat
ttgaccgagctgtcctcgcagatcctgaaaatggagagaactgtggtgcccccagagaac
atcagaaacctctacagtgactcccctcacctgctgtacctgttggaactcacctggatg
gacgccaagctgatcctgcagattatgtgcgaacttaacgtgcttccgttggcgcttcag
attaccaacatcgctggcaacgtcatgtctcggacgctgatgggcggtcgctcggagagg
aacgagtacctgctgcttcacgccttcaacgaaaggaacttcattgttccagacaagcag
ttcttcaagaagcctcaacaaaatcttggtgaagatgagggtttggaagtggggaaaagc
aagtctgggaaagtgaggaagaaggctgcttatgctggaggtctggtgctggaacccaaa
gttggtttctatgacaagtttattctgctgctggacttcaacagtctgtacccctccatc
atccaggagttcaacatctgtttcaccacaattcagcgagaggcgtctaactcgcgcaaa
aagaccgaggaagacgacccagacgagattccagagcttcctgatcctgatctggagatg
ggcgtccttccgaaggagatccgcaagcttgtggagcgcaggcgacaggtcaaacagctg
atgaagcagcctgatctgaaccccgatctttacatgcagtatgacattagacagaaggct
ttgaaactgaccgctaacagcatgtatggatgtctgggattctccttcagtcgcttctat
gccaaacccctggctgcactggtcactcacaagggtcgagagatcctaatgcataccaag
gacatggttcaaaagatgaacctggacgtgatctacggagacaccgactccattatgatc
aacaccaacagctccaacctggaggaggtcttcaaactgggcaacaaggttaagagcgag
gtgaacaaactgtacaagctgctggagctcgacattgacggcgtgttcaagtcactgctg
ctgctgaaaaagaaaaagtacgccgccctggtggtggagtcgcacggagagggccgctac
accaccaaacaggagctcaaaggcctggacattgtccgcagggactggtgtgatctcgcc
aaggagtgcggcaactacgtcattggtcagattctgtctgaccagaaccgcgacaccatt
ctggagaacattcagcagcacctcatagaaatgggggagaaagtggccaacggcagcgtc
cctctaaacatgttcgagatccacaaggctttgaccaaagaccctcaggactacccagac
aagaagagcctcccccacgtccacgtcgccctctggatcaactctcaaggaggccggaag
gtcaaagcgggcgacacggtttcctacatcatctgtcaggacggttcgaacctggcagcc
agtcagagagcctacgctccggagcagctgcagaagcaaccgggcctgaccctggacact
cagtactacctctcgcagcaagttcaccccgtggtggggcgcatatgcgaacccatcgag
ggtatcgacaccgtactcatcgctacttggctgggtctggaccccactcagttccgcgcc
cagcagaggcagcagcgagaggaggaatccgacagtttcgtcggcgtcccggctcagctg
acggacgaggaacgctaccgagactgcgagaggtttgccttcgcctgtcccgactgcggg
accgagaacatttacgacagcgcgtttgagggaacgggaagcgtgatcgaaccgagtctg
aggcgctgctgtcagatctcctgtaacgggagcccgctgcggcacaccgtccgaatcggc
aacagactgctgctggacgtccgacgccacgtccggaaatactacagtggctggctgctg
tgtgaggaccaggcctgtgggaatcgaacacgccgcctacccatcgcattctcccgctca
ggccctatgtgtcccgtctgctccaagtctactctcagacccgagtattccgagaaagcg
ctctacaaccagctgagcttctacaggttcatcttcgattgggaatacgccgtcgccaag
gtccttcagccagacgagaaacagaaactgaagagcgcatcgaatgaagagaaagcagcg
tacacgaagctgaaggcactactggaccgggtcctgctgtccagcagctactccgaggtc
aacctcgccaagctcttccaagcctttacctcactgaagtag
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integrated database retrieval system
