Trichomycterus rosablanca: 134301258
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Entry
134301258 CDS
T09921
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134301258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134301258
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134301258
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134301258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
Baculo_IE-1
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
134301258
NCBI-ProteinID:
XP_062841952
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All DBs
Position
23:complement(1480865..1482587)
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AA seq
388 aa
AA seq
DB search
MRKARGAEEILEEIRSDLLECKVCFEQFIFDRRSQRPRNLPCGHLICLSCVCALSHPVSR
HLECPFCRTPCEEGGTYECQALVDLNDLVGSYFLQPEGRVPAWQQGSGSGVMRLCRTFGG
WDWIVNPTGVAVSGSEVLVVHGGSEKGAGFERHGKFLRTFGREICYPLDVAVAPSGHVVV
TDAGDCSVKVFSPVRHLVATISGLFELPWGVDMDSSGHILVTDASSGTVWQLMMDFQRSV
VLVKRVVVRDLHHPRAVSCCRSSGHVLIVEHLGNQPKNDELLTRLNLFSKDLVLLKQLDT
FSLDLTTSVRLSISAVAFDKKGDLIVADADHGIIWSLGDLQEMPVLIPLIKEGLLRPVGL
AMTEENVLIVLDGEDHAIKMYCSQPVTT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagcccgaggagctgaggagatcctggaggagatccgatctgacctgctggag
tgtaaggtttgcttcgagcagttcatcttcgacagaagatctcagagaccgcgtaacctg
ccctgtggtcatctgatctgtctgagctgcgtctgcgccctgtctcaccccgtctcgcgc
cacctcgagtgcccgttctgcaggacgccctgcgaggaaggtggcacctacgaatgccag
gccctggttgaccttaatgatctcgttggatcgtattttcttcaaccggaggggagagtg
ccagcctggcagcaggggtcggggtcgggagtgatgcgtctgtgcaggacgtttggagga
tgggattggatcgtgaacccgaccggtgtggcggtgtccgggtcagaggtcctggtggtg
cacggagggtcagaaaaaggggccgggttcgaacgtcatgggaaattcttgagaactttc
ggtcgtgaaatctgctacccgctggacgttgccgtggctccaagcggacatgtcgtggtg
actgatgcgggcgactgctcggtcaaggtgttttcgcctgtaagacatctggtagccact
atctcgggcctttttgagctcccttggggtgttgacatggactcctcaggtcacatcctg
gtgacagacgccagctctggtacagtctggcaactgatgatggactttcagcgcagtgtc
gttttggttaaaagagtggtggtgagggacctacatcatccacgggctgtcagctgctgc
agatcatctggacatgttctgatcgtcgagcacctcgggaaccaacctaaaaacgatgag
ctgctgacgcgcctaaatctgttcagtaaggacctggtccttctgaagcagctggacact
ttcagcctggacctgaccacttcggtgaggctgagcatctcggctgtagcgtttgataaa
aagggggatttaatcgtagccgatgcagatcacgggatcatctggagtttgggtgatctg
caggagatgcccgtgttgattcctctgatcaaagagggactgctgcgtccggtgggacta
gcaatgaccgaagagaatgtcctgattgtcctggatggtgaagatcacgctataaagatg
tactgtagtcagccagttacgacttaa
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