Trichomycterus rosablanca: 134301537
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Entry
134301537 CDS
T09921
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134301537 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134301537 (usp48)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134301537 (usp48)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134301537 (usp48)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134301537 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
134301537
NCBI-ProteinID:
XP_062842348
LinkDB
All DBs
Position
24:17936817..17949116
Genome browser
AA seq
1044 aa
AA seq
DB search
MAPRLQLEKAAWRWVDTVAPEEITQEHIELAYRIAVPTCKRGTCRRNCKGNPNCLVGIGE
HTWLREINENSFHNIDDPNSERRDQNTFVGLTNLGATCYVNTFLQVWFHNLELRRMLYQC
NNSRAEVHNAVSDYEPKTICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKDPNLQNVIQQQFCGQFSYVTVCNHCGRSSALPSRFYELELNIQG
HKNLTECITEFLKEEKLDGDNRYFCENCQNKQCATRRIKLHSLPRTLNLQLMRFVFDRQS
AHKKKLNTYISFPEVLDMSPFLGKDETCLYELSAVLIHRGVSAYSGHYIAHVRDACTNDW
YKFNDEEIEKMEGKKLQLGIEEDLAETAKSQTRRPKHSKGFHCSRNAYMLVYKRQEEQVD
QPQAAVEVPGFLQKLVDQDNKKFEEWCSEMADMRKQSVDKGKAKHVEVKELYELLPPKDG
EPYEFVPLDWLKKWLDDSTAIKAIDNSPFLCSHGNLHPDSLGEAKRISHSAAEILFNRYG
GGPRIDGSFLCRDCVARRCHVLRLKNQLTKDYREVSNLAKDTLKSGEPGFWVGKASIKQW
RQLALEQLEEEEDRSTNSDCKMNGDDNCQDLSEDVRENNRDNEEMKNFNEDILCHHGGLS
IQETERRLVSAEVWSKLRLYFPKAPEFTEKQESCQQCTRLEVEGKENEALNRMMANEQKN
SLLNLFHEKNRPSLQKWPQDTNILYIVPLFFVEEWRKFIRKPAKSNPVSSVSNSILLCPH
GGFMFTYDSMLQGDGQHIALLWPAEWEVICRLFLVDQPISICRTEDTTQGNGNVLYQTQP
ELCGECREGFIFQQQRDLREYAQATVYVRKVIDSKKMLKEPVPEFSMSGSEAEEEKEEPK
IEGEKDPDFNQSEDGAKRQRLNEPSAAVAVAAPAAVGKSGIRRSQRHRKLRGEKALIVSA
NQTLKELKIQIMHAFSVAPFDQNLSIDGRLLTDDSATLGSLGVFPESIICLKADEPIADY
AAMDDAYQVCLPEEGFKGTGLLGH
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcggctgcagctggagaaagccgcttggcggtgggtcgatacagtcgcacca
gaagagatcacacaggaacatatcgagttagcgtaccgtatcgctgtacccacctgcaag
agaggaacgtgcaggagaaactgcaaagggaatcctaactgcttagttggtatcggtgaa
catacatggttgagggaaatcaatgaaaattccttccataacatagacgatccaaactct
gagagaagagaccagaacacgtttgtcggtttaacaaacctcggtgccacttgttatgtg
aacactttcctccaggtgtggttccacaatctggagctgcgccgaatgctctaccagtgt
aacaactccagagctgaagtgcacaatgcggtgtcagattatgaaccaaagacgatatgt
gagcacctgcagtacctgtttgcactgctgcagaacagcaacaggagatacatcgatccc
tcgggtttggtaaaagcactgggacttgatacggggcaacagcaggatgcacaggagttc
tccaaacttttcctttcacttctggaagacaccttgtccaagcagaaggacccaaacctc
caaaatgtgatccagcagcagttctgtggacagttttcatacgtcactgtatgtaaccac
tgtggcagatcgtctgctttaccatctcggttctacgagctggaactcaacatccaaggg
cacaaaaacctgacggagtgcatcaccgaatttctcaaggaggagaaattagacggggat
aaccggtacttctgtgaaaactgtcagaataaacaatgtgccacacgtcggatcaagctc
cacagcctgccacggacacttaaccttcaactgatgcgttttgtgttcgataggcagtct
gctcacaagaagaaactgaacacgtatattagttttcccgaggtccttgatatgagccca
tttttaggaaaagacgagacgtgtttgtatgagctgagcgctgtcctgatccaccggggt
gtgagcgcctactcgggccactacattgctcacgtacgggacgcctgcaccaacgactgg
tacaagttcaatgatgaagagattgagaagatggagggcaagaagctccagctgggcatc
gaggaggatctagctgaaacagccaagtctcagacgcggaggcccaaacacagcaaaggc
tttcactgctcgagaaacgcctacatgttggtgtataaacgtcaggaggaacaggtggac
caaccacaggcagccgttgaggtaccaggctttctccaaaagctggtggatcaggacaat
aagaagtttgaggagtggtgcagtgagatggcagacatgaggaagcagagcgtggataaa
ggcaaagccaaacacgtcgaagtcaaagagctgtatgagctgttaccaccaaaagatggt
gagccttatgagtttgtgcctctggattggctaaagaaatggctggatgactcgacagcc
atcaaagccatcgataacagcccgtttctgtgctcacacggaaatctgcacccggacagt
ctcggcgaggctaaacgtatctcacacagtgctgccgagatcctcttcaaccgctatggt
ggaggacccagaatagacgggtcgtttctgtgccgagactgcgtggccagacggtgccat
gtgctgaggcttaaaaatcaactgactaaagactacagagaagtaagcaacctcgctaag
gacacactgaaaagtggtgaaccaggcttctgggtagggaaagcttctataaagcagtgg
aggcagctggctctagagcagctagaggaggaggaagataggagcaccaacagcgactgc
aaaatgaacggagacgacaactgtcaagatctgagcgaggacgtgagggagaataacaga
gataatgaggagatgaagaactttaatgaagacattctctgccatcatggtggattgagt
attcaggagaccgagaggcgactggtatcagccgaggtgtggagcaagctgagactttat
tttcctaaagcacccgagtttacagagaaacaggagtcctgtcagcagtgcacgaggctg
gaagtcgagggtaaagagaacgaggcactaaatcgaatgatggccaacgagcagaagaac
tccttgctcaatctcttccatgagaagaatcgtccctcactgcagaaatggccacaggac
acaaatatcctgtacatcgttcctttattctttgttgaagagtggaggaaatttatcagg
aagccggcaaagtcgaatcctgtgtccagcgtcagtaacagcatcctactgtgccctcac
ggcggcttcatgtttacctatgactccatgcttcagggcgatggccagcatatagctctg
ctctggcctgctgaatgggaggtgatctgcaggctgttcttggtggaccagcccatttcc
atctgcaggactgaagatacgacacagggcaacgggaatgtgctgtaccaaacccagcca
gagctgtgtggagaatgtcgcgaaggctttatatttcagcagcagagagacctgcgggag
tacgcacaggccactgtttatgtacgaaaggtcatcgacagtaagaagatgcttaaggag
cctgtacctgaatttagcatgagcggatctgaggcagaagaagagaaagaagagcccaaa
atagaaggagagaaagatccagactttaaccagtccgaggatggagcgaagcggcagagg
ctgaacgagccgagcgctgccgtcgccgtcgccgcccctgctgcggtggggaaatctggg
attcgacgcagccagcggcaccggaagctgcgtggagagaaagccctcatcgtctccgcc
aaccagaccctaaaggaactcaagatccagatcatgcacgcattctccgtcgcaccgttc
gaccaaaacctgtctatagacggccgcttgttaaccgatgactcggctacactaggcagc
ctcggagtgtttccagaaagcatcatatgtctgaaggctgatgaacctattgcagattac
gctgctatggatgatgcataccaagtctgtctacctgaagaaggatttaaaggtactggt
ttattgggacactga
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