Trichomycterus rosablanca: 134301682
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Entry
134301682 CDS
T09921
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn04060
Cytokine-cytokine receptor interaction
trn04217
Necroptosis
trn04620
Toll-like receptor signaling pathway
trn04621
NOD-like receptor signaling pathway
trn04622
RIG-I-like receptor signaling pathway
trn04623
Cytosolic DNA-sensing pathway
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134301682
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134301682
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134301682
04621 NOD-like receptor signaling pathway
134301682
04622 RIG-I-like receptor signaling pathway
134301682
04623 Cytosolic DNA-sensing pathway
134301682
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134301682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
trn04052
]
134301682
Cytokines and neuropeptides [BR:
trn04052
]
Cytokines
Interferons
134301682
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Gene cluster
GFIT
Motif
Pfam:
Interferon
HCR
Motif
Other DBs
NCBI-GeneID:
134301682
NCBI-ProteinID:
XP_062842573
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Position
2:complement(43401223..43403510)
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AA seq
186 aa
AA seq
DB search
MNALQGFTLLCTVIICMEHVWTRPMNCRLQRGLVENCQTLLESVGGRFPLQCLDDNVLVP
FPEAAFEFNSSQQAVALEKSVYSTLTYIFSVFDEDEVPDQWKSLDDFQNVVFRQIEEYQC
IMSKTQDSLDDFLMRDNALKEYFGKIQTILKDKDFQYCGWEFVRKEVLKTLQFILQKNLD
GTVWSR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcttcagggttttaccttgctgtgcacagtgatcatctgcatggagcacgtt
tggacaaggcccatgaactgccggcttcagagaggactggtggagaactgtcaaactctt
ctggagagtgtggggggcagatttcctttgcagtgtcttgatgacaatgtgttggtccct
tttcctgaggctgcatttgagtttaacagttctcaacaggctgttgctttggaaaagtca
gtttactcaacactgacgtacatcttctcggtgtttgatgaggacgaagttcctgatcag
tggaagtccctggatgattttcagaacgtcgtttttcgccagatcgaggaataccaatgt
attatgagcaaaacgcaggactcactggatgactttcttatgagagataatgccctcaag
gagtactttggcaaaatacagacgattttaaaagacaaggattttcaatattgcggatgg
gaatttgtgagaaaagaagttttaaaaacattacagttcatactgcagaaaaacttggat
ggcacagtctggtccagatga
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