Trichomycterus rosablanca: 134301685
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Entry
134301685 CDS
T09921
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134301685 (ppfia4)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134301685 (ppfia4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
ATG16
Dehydrin
Motif
Other DBs
NCBI-GeneID:
134301685
NCBI-ProteinID:
XP_062842572
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All DBs
Position
24:complement(8718667..8844186)
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AA seq
1196 aa
AA seq
DB search
MMCEVMPTINEGDSSSSQRGSQNGSDGESNFEQLMVNMLDERDKLLESLRETRDALVQSQ
AKLQEALHERDALQRQISSSLPQEFTTLTKELSGCREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRIA
LERVTSLEGQLAATTQELTIVREGRDGKTNGNKPNWKRLPNGSIDVHDDSARSLELQELL
DKANKDLAASRERGNTLNARVAELEGELTSVRKELLKNEEFNARHQRDIREAMAQKEDME
KRITTLEKRYLAAQRETTSIHDLNDKLENELATKDSLYRQSEEKVRHLQELLELAEQRLQ
QTMRKAETLPEVEAELAQRVAALTKAEERHGNIEERLRQLESQLEEKNQELGRARQREKM
NEEHNRRLSDTVDRLLTESNERLQLHLKERMAALEDKNGLIQDLENSQKQLEEFHHNKER
LIGEIEKLRSELDHMKRRSGVFGDPRSHLGSATDLRFSVVEGQGDHYASTGVIRRTQKGR
LVALRDEPTKILPLLKQEWERCQSAASLRGSRTHLMGSDTELSELDDDDRDTVFSGGDML
SPSGHSDAQTLALMLQEQLDAINEEIRMIQVERESAELRADEIESRVNSGSIDGLNVTLR
PRSTIPTSVTALSLTSSSPPVSGRSTPKMASRSTAHELGVMTLPSDLRKHRRKVASPEEG
REDKATIKCEMSPPSSPRSLKLDEMNFSQLTGSLEDGRGGNKKKGIKSSIGRLFGKKDKG
QPLSKDGHITPPVILDFEMGIGDTMTLGKQAERDRRLKKKHELLEGARRKGLPFAQWDGP
TVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEM
VSLTSPSAPLTSRTSSGNVWVTHEEMENMATSTKADKEEGSWAQTLAYGDMNHEWIGNEW
LPSLGLPQYRSYFMECLVDARMLDHLTKKDLRTHLKMVDSFHRASLQYGIMCLKRLNYDR
KELERRRDECQQDVKDTLVWTNEHVMNWVQTIGLKDYSNNLQESGVHGSLIALDETFDFS
SLALILQIPMQNTQARQILEREFSNLLALGTDRRLEECDDKSFRRTPSWRKRYRPRDGQG
LGMMPGSIETLPAGFHLSTMSIPSSMVVIPKKQLQPEAGPQAPQKLDPSTIRTYSC
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgcccaccatcaacgaaggggactccagcagttcccagagaggt
tcccagaacggctcagatggcgaatccaatttcgagcagctgatggtgaacatgctggac
gagagagacaagctgctggagtccttacgggagacccgagatgccctggtgcagtcccag
gccaagctccaggaggcccttcacgaacgggatgccctccaaaggcagatcagctcctcc
ctgccgcaggagtttacgacattaacgaaggagctgagtggatgtcgggagcagctgctg
gagaaggaggaggagatctcagagcttaaagcagagaggaacaacaccaggctccttctc
gagcatctggagtgcttggtgtcacgtcacgagaggtctttgaggatgaccgtggtgaag
agacaggctcctccaccctccggagtctccagtgaagtggaggtgctgaaagctcttaaa
tctttgttcgagcaccacaaagctctggatgagaaggtgcgggagcggttgcggatagcc
ctggagcgagtgacatcactagaggggcagctggcagccaccactcaggagctgaccata
gtgcgagagggtagagatggaaagacgaatggaaataagccaaactggaagaggcttcca
aacggctctatagacgtccacgacgattccgctcgttctttggagctgcaggaactgcta
gacaaggccaataaagacctggcggcaagtcgcgagcgtggcaacacgctgaacgcccgt
gtagctgagctggagggtgaactcaccagcgtccgaaaggagctgctgaagaacgaggag
ttcaatgccaggcaccagagagatattcgagaggccatggcacagaaagaggacatggaa
aagcgaatcacaacgctggagaagcgctacctggctgcacagcgtgaaaccacatctatt
catgacctgaatgacaagctggagaatgagctggctacaaaggactcgctctatcggcag
agcgaggagaaagtacggcatctgcaagagctgttggagctggctgagcagagactccag
cagaccatgaggaaagccgaaacgctgccagaggtggaggctgaactggcacagagagtg
gctgctcttaccaaggcagaggaacgtcacgggaacatcgaggaacgccttcgacagctg
gagtcacagctggaggagaagaaccaggaattgggacgggctcgtcaaagagaaaaaatg
aacgaggagcacaacaggcgtctgtcagacacagtggaccgtctgcttaccgagtctaac
gaacggctgcagctccacctgaaggaacgcatggctgccctagaggacaagaatggactc
atccaggatttggagaattcccaaaagcagctggaggagttccatcacaataaggaaaga
ctaataggggaaatcgagaagcttcggtcagagcttgatcatatgaagagaagaagtgga
gttttcggagaccctcgatctcacctgggtagtgccacagatctgcgtttctccgtggtg
gagggacagggagatcactatgccagtacaggagtcattagacgcacccagaaagggcga
ctggtagcactcagggatgagcccacgaagatcctaccgttactgaagcaggagtgggag
cgatgccagtcagctgccagcctccgtggcagccgcacacacctgatgggcagcgacaca
gaactctcagagctagacgatgatgaccgtgacacagtgttcagcggaggggacatgctg
tctcccagtggccactcggatgcccagacccttgcccttatgttgcaggagcagctggat
gccattaatgaggagatcaggatgatccaggtggaacgagagtcggccgagctccgggcg
gacgagatcgagagccgagtgaacagtggcagtatagacgggctcaacgtgaccctgcga
ccacgttccaccatccccacctcagtcacagccctctccctcactagctcctcgccccct
gtcagcgggcgctccactcccaagatggcatctcgttccactgcccatgagctgggagtc
atgaccctgccaagcgacttgagaaagcaccgcaggaaagtcgcctctccagaggaaggt
cgggaggataaagccactataaagtgtgagatgtctccaccttcatcgccacgcagtctg
aaacttgatgagatgaacttttcccagctgactggaagcctggaggatggacgagggggt
aataagaagaaaggtatcaagtcctccattggtcgccttttcggcaagaaggataaaggc
caaccgctgagcaaagatggccacataactccacctgtgattctagattttgagatgggc
atcggtgataccatgaccctgggcaagcaagctgagagagaccgccggctgaaaaagaaa
catgagcttttagaaggcgcacggagaaaaggcctcccattcgctcaatgggacggccca
acggtagtctcatggcttgagctctgggtgggcatgccagcttggtatgtagcggcatgt
cgcgccaacgtgaaaagcggtgctatcatgtcagccctgtccgacacggagatccagagg
gagatcggcatcagcaaccccctgcatcgactcaagcttaggctggccatccaggagatg
gtgtccctcaccagtccttcagcgccgctcacctcacgcacttcctccggaaatgtctgg
gtgactcacgaagagatggagaacatggcaacctctaccaaagcagataaggaggaagga
agctgggcacagactctggcgtacggcgacatgaaccacgaatggatcggaaacgaatgg
ctcccgagtctcggcctgcctcagtatcgcagctacttcatggagtgtctggtggatgct
cggatgctggaccacctcaccaagaaggacctgcgtacgcatcttaaaatggtggacagc
tttcacagagccagtttacagtatggcatcatgtgcttaaagagacttaactacgacagg
aaggagctggaacgaaggcgagacgagtgccaacaggatgtcaaagatactctggtatgg
accaatgagcatgtgatgaactgggtacagaccatcgggcttaaggactacagcaataat
cttcaggagagcggtgttcacggttccctcatcgccttggatgagacttttgacttcagc
agcctggctctcatcctgcagatccccatgcagaacacacaggccagacagatcctggaa
cgggagttcagcaatcttttagccctggggactgacaggcgtctggaagagtgcgacgat
aagtcattccggagaaccccatcgtggagaaaacgctacagaccacgagatggccaaggc
ctgggcatgatgcccggctccattgagacgctacctgctggtttccacctctccaccatg
tccattccgtcctccatggttgtcattcccaagaaacagctgcagcctgaagcaggaccc
caagcccctcagaaacttgacccgtccacaatcaggacttactcctgctaa
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