KEGG   Trichomycterus rosablanca: 134301730
Entry
134301730         CDS       T09921                                 
Name
(RefSeq) transcription factor SOX-13-like
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:trn03000]
    134301730
Transcription factors [BR:trn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    134301730
Motif
Pfam: HMG_box HMG_box_2 COG3_N
Other DBs
NCBI-GeneID: 134301730
NCBI-ProteinID: XP_062842641
LinkDB
Position
24:complement(5863274..5903679)
AA seq 605 aa
MCEPSSPVLQPNASGNVSKVGVGVKLEEVSGDTGGVRDSQHSSPSYDWSARMHTERADPE
KSTIRIQQSPLASSPIKEQMHRFSPASQDELKRTHDKPETQSNVSEVLPTIEKLLNSDWR
EKILGKGFQSTANLKSTPESLAEKEFQLLLMINQLSGLREQLLGAHSEQRNMAALLLEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQVNLPYVMIPAFHPNTQTLPDTQMG
LPLQPIPCKPVEYPMQLLQNPHSNPLKRPSGTGVRQDINQPLNLTAKPKTPSPLSLELAS
AHLQSTYRMRELQHSPTRTALGLGFLGEGDIVSQTIHDAQQLLRGGQGLASREREGSTRL
SEYKEVSRTDRMLHNNRTDDGQSIRTNDEHLSSDSEGPIAGMGGYGDSRTTSSGHIKRPM
NAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERY
PDYKYKPRPKRTCIVEGRRLRVGEYKAMMKNRRQEQRSSYPPSQSEQQLHYPSAEAQYPS
KPVAMALPLHPSLLEHYLPRSIDPPQPPRAPEESDRPGANKTPYSEGEESDAGERSEGEL
VVLTD
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgtgtgagcccagctctcccgtgctacaacccaacgccagtggcaatgtatccaaggtg
ggagtcggtgtcaagttggaagaggtgtctggagacacaggcggagtcagggactcccaa
cactcctcaccttcctatgattggtcagcgcggatgcacacagaacgggccgatcctgaa
aagtccacaattcgcatccagcagtctcctttggccagttctcccattaaagagcagatg
cacaggttcagtcctgccagtcaggatgagctgaaaaggacccatgataaacctgaaacc
caatcgaatgtcagcgaggtgctgcccaccattgagaaactcctgaattcagactggaga
gagaagattttgggcaaaggattccaaagcactgccaacttgaaaagcacaccggagagc
ttggctgagaaggagtttcagctgttactgatgattaaccagttgtccggcttaagggag
cagttgctgggagcacactcggagcagaggaacatggcggccctgctcctggagaaacag
cagcagcagatggaactggcacgccagcaacaggaacagattgctaagcagcagcagcag
ttaatccaacagcagcataagatcaacttgctgcaacagcagattcaggtgaacctgccc
tatgtgatgatcccagctttccaccccaacacccagacattaccagatacacagatgggt
ctgccgcttcagcccattccctgcaaacctgtggaataccccatgcagcttctccagaac
cctcactccaaccctctgaaaagaccaagtggtacaggagttcggcaggacatcaatcag
cctctgaacctgacagccaaaccgaaaaccccgagcccgctgagtctggaactggcatcc
gcccacctgcagtccacctacaggatgagggagctacagcacagcccaactagaactgca
cttggcctgggcttcttgggagagggtgatatcgtgagccagaccatccacgatgcccag
cagctgttgcgcggaggccaaggtctggcgagccgagaaagagagggcagcacgaggctg
agcgagtacaaggaagtctccagaactgaccgcatgctccacaataatcgcacggatgac
ggacagtccatacggacgaacgatgagcatcttagcagtgactctgaggggccgatcgct
ggcatggggggctacggtgacagtcggacgacgtcgtctggccatataaagcgaccaatg
aacgcctttatggtgtgggcgaaagacgaacggaggcgcatcctacaggcctttccggac
atgcataactcgagcatcagcaagattctgggctcacgctggaagtccatgtccaaccag
gagaagcagccatactatgaggagcaggcccggctgagccggcagcacctggagcgctac
ccagactacaagtacaagccccgaccaaagcgcacatgcatcgtggagggccggcgcctg
cgcgtgggcgagtataaagctatgatgaaaaaccggaggcaagagcagcggtcctcgtac
ccacccagccaatcagagcagcagctgcactacccatcagcagaggctcagtaccccagc
aagcctgtcgccatggccctgccattgcacccttccttgctggagcactacctcccccgt
tccatagacccacctcaacccccacgagctcctgaggagtccgacaggcccggtgccaac
aaaacaccgtacagcgagggtgaggagagtgatgcaggagagcgcagcgagggagagctg
gtggtccttacagactga

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