Trichomycterus rosablanca: 134301738
Help
Entry
134301738 CDS
T09921
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134301738 (traip)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134301738 (traip)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134301738 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_11
Sec3_CC
zf-RING_Vps41
zf-C3HC4_4
Crescentin
TSNAXIP1_N
zf-RING_16
MAD
RINGv
CENP-F_leu_zip
zf-RING-like
zf_RING_Vps8
Fez1
CALCOCO1
Gp58
GPS2_interact
Zn_ribbon_8
HIP1_clath_bdg
Myosin_tail_1
KASH_CCD
USP8_interact
RING_XB3-XBAT31
bZIP_1
DUF5600
Ezh2_MCSS
zf-Nse
SLX1_C
FapA
COG3_N
CCDC113_CCDC96_CC
DUF5713
DUF730
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
134301738
NCBI-ProteinID:
XP_062842651
LinkDB
All DBs
Position
24:18415951..18422284
Genome browser
AA seq
451 aa
AA seq
DB search
MPIRAYCTICSDYFDHSRDVAAIFCGHTFHYECLLQWFQTAPSKTCPQCRKQVSGRHIIN
KLFFDMPTEEEETSADPESLQNELDRMKVLLCEKERDWRDKQKAADALKETIERQRSDLD
RVRREIGEKEMLCSTLRKQMQYLESQHRDSQAAKEEAKRLRVKMKTYESLDLVLQGQRAE
VEAMISDMGVNQSAVEQLSIYCISLKKEYDNLKGSLKTSNEMCEKLKREVFTSSNKLQKS
TLEMNRMKEDMNALQNDLTNSDKEITSLRKKVEILQKTLSTPNRTNEAISRLVFESPAPL
ELKTPRLHQPTDSQDIDLNLTFDISTPELVEKKAAAVPSKKMRLDPAATSSKPGENALGS
KVSHQKEDAEPMFRNSLLYRKKTFGSMLDPHSKPGAVKTGYDGLGGRTKYFQPSPLSEIR
PLMMKAKRKKVSRPVPSKLTPNLTTLDGFLE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgcttattgcactatctgttcggattatttcgaccactccagagacgtt
gcagctattttctgcggacacacttttcactatgagtgccttcttcagtggttccagacg
gctcccagtaaaacctgtccacaatgcaggaaacaggtgagtggaagacacataatcaac
aagctgttcttcgatatgccaacagaagaagaggaaacttctgcagatcctgaaagcttg
cagaacgagctggacagaatgaaggtgcttctctgcgagaaagagagggactggagagac
aagcagaaggcggccgatgccctgaaggagacgatcgagaggcagagatctgatctggac
cgagtgaggagagagattggagagaaggaaatgctctgtagcaccttaagaaaacagatg
cagtatttggagagccagcacagagacagccaagctgctaaagaggaggccaagcggctt
cgggtcaaaatgaaaacgtacgaaagtttggacctggtgttgcagggacagagggctgaa
gtggaggccatgatctcagacatgggtgtgaaccagtcggccgtggagcagctctccatc
tactgcatctcgctcaaaaaagagtacgataatctgaaaggcagcctcaagacctccaac
gagatgtgtgagaaactgaagcgggaagttttcacctccagtaacaagctgcagaaatcc
acgttggagatgaacaggatgaaggaggacatgaacgctcttcagaacgacctcaccaac
tccgataaggagatcacgagtctgaggaagaaggtggagatcttacagaagaccctgagt
acacccaaccgcaccaacgaagccatcagccgactcgtcttcgagagtcccgcacctctg
gagctgaagaccccccgcctgcaccagcccacggacagccaggacatcgacctcaacctg
acgttcgacatcagcacgccggagctggtggagaagaaagcggccgccgtcccctccaag
aagatgcgcctggatccagcagcgacttcatcgaaacccggcgagaacgcgctcgggagt
aaggtctcgcatcagaaggaggacgcggagcccatgttcaggaactcgctcctctacagg
aagaagacgttcggcagcatgctcgacccgcacagcaaacccggagctgtgaagacggga
tacgacggactgggaggaagaaccaaatatttccagccttcccctctgtctgagatcaga
cctctgatgatgaaggccaagaggaagaaggtgtccaggccggtgcccagcaagctcacc
cccaacctcaccacgctcgatgggttcctggagtga
DBGET
integrated database retrieval system
