Trichomycterus rosablanca: 134301909
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Entry
134301909 CDS
T09921
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
trn00535
]
134301909 (optc)
Proteoglycans [BR:
trn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
134301909 (optc)
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
134301909
NCBI-ProteinID:
XP_062842906
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Position
24:8281037..8287566
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AA seq
337 aa
AA seq
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MALHVAVALVLLSTCWGAPPGSQNQTKFDTESYDVDVDVNAWDLNSYGETYGYDVLDEEE
KGDIEVGTVAPPSAITHPIPAVTTLPPPADVPQASTIGVTLPSLNSKPTVHPTLDFKAPG
LFGPATGLGMPTCLLCVCIGGSVYCDDSDLVEIPPLPKDTTHFYARFNKITEVKAKTFLN
MNQLKRIDLTGNQISTLDQDSFLSLPELQDLFLADNRIEFLPELPTTMRHIDVRGNRLKS
AGMHREGFKEMKDLHFLYLSDNQLDYVPVPLPESLRALHLQNNNIQSLNADTFCNSHDLS
YTRKALEDIRLDGNPLNLNQYPQAYVCLPRLPVGRSR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcatgtagctgttgctctggtattgctcagtacctgttggggagctccgccg
ggcagtcagaatcaaacgaaatttgatacagagagctatgatgtggacgtggatgtgaac
gcgtgggacctgaacagctatggagagacctacggctacgatgtcttggatgaggaggag
aagggggacattgaggttgggactgtcgctcctccatcagccattactcacccaattcca
gctgttacaaccctaccacctcctgcagatgttcctcaagcctcaacgataggggtgaca
cttccatccctaaacagcaaaccaacagtccaccctacactggacttcaaggcgcctgga
ctctttggaccagctaccggccttggaatgcccacttgcctgctgtgtgtgtgcatcggt
ggcagcgtgtattgtgatgattctgatttggttgagatcccacctttgcccaaggacacc
acccacttttacgcccgctttaataaaattacagaagtcaaagccaagacatttttaaac
atgaatcagctgaagagaattgatttaacagggaatcagatctccaccctggaccaggac
tcctttctctcacttccagagctccaggatctatttttagctgataacaggatcgagttt
ctgcccgagcttccgactaccatgaggcacatcgatgttcgggggaaccgtctgaagagc
gccggcatgcacagagagggatttaaggaaatgaaagacctgcacttcctgtacctgtca
gataaccagctcgactatgtacccgtcccacttcctgaaagtctgcgagcgcttcatctg
cagaacaacaatatccagagcttgaacgcagacacgttctgcaacagtcatgacctcagc
tacacacgcaaggctttggaggacatccggctggacggaaaccctctgaatctgaaccag
tatccgcaggcctacgtttgtctgccacgtctgcctgtaggacgctcacgctga
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