Trichomycterus rosablanca: 134301945
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Entry
134301945 CDS
T09921
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1
KO
K23026
LIM domain and actin-binding protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134301945 (lima1b)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
134301945 (lima1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
134301945
NCBI-ProteinID:
XP_062842956
LinkDB
All DBs
Position
24:773630..802270
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AA seq
738 aa
AA seq
DB search
MEPSPFSRKQWTSQSLRITAKELSLVGSRGKNTAIAERLSKYQKAAEEAQGEKKKMGVEG
LPPALRSGNLSVLKKRWERPGPSRPELPAELRPLVRSASQRPVRVKQETKVREEEAAAAE
TNRESQKKEARPERQNSKETAEIKVDRQKEEEDLETRQEVKKEETAETKRERPQEDVVET
KLNKQRSEEAMETKQERKLEEQERGDEEQKKEQPSVALNSLKMMFEKGEPKVVQVRGGRS
STSDDMDLRPPEKGRVSVERSKSLRDRMAQYQAAVSKDIRPLPNPINLVDIEIKSTRVDH
KENVPPGGGEQAESSTSESISTKPNGVLADAGSSGTAASEPETNDAPKFVRGQKFRSTVR
ETCVACSKTVYPLEKLVANQQTFHTACFRCIHCNTRLSLANFACLHGSIYCKPHFSQLFK
SKGNYDEGFGHRPHKELWSPRTDEDENEESEKPKPFSVDPPPAKPAPERSTNPDSTVEET
PLVKVTDVAASLETKTQKPVKELEKSGASAETKRLRIDWPPRTDGTSLPKISGPPAERGK
SPVRVFKLKWPPEDEAQTNSESTERVELKNLRRCTSLKERSRPFSVAPRLESAANQEPQR
SPRSASLRRGSLEELRTASRVQREKPEEDGEPSESTNTSSEPEVPHKPEETPKVPQSILK
KPSRTASIEQQSEAQKVPEKPQELLQVSDQPTLEEKSTRAGQDDARSEAEEPENGLSVEE
MIKKNRYYDEEDEEVNDV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtcgccgttcagcaggaagcagtggacgtcacagtcgctacgtatcacagcc
aaggagctctcactggtcggcagtcgagggaaaaacaccgccattgctgaacgactgtcc
aaatatcagaaggcagcagaggaagctcagggtgagaagaagaagatgggggtggagggt
ttacctccagctctgcgttcggggaacctgagcgtgctgaagaagcgctgggagcgtccg
gggccgtcccgaccagaacttccggcagagcttcgacccctggttcgctcggccagtcag
agaccggtgagggtcaagcaagaaacaaaggttcgggaggaggaagcggcagcggcggag
acgaatcgagagagccagaagaaggaggcgagaccagagagacagaactcgaaggagacg
gcggagataaaagtggacaggcagaaggaggaagaagatctggaaaccaggcaggaagtc
aagaaggaggagacggcggagactaagcgggagcggccgcaggaagacgtggtggaaacc
aaactaaacaaacagagaagtgaggaggcgatggagacgaagcaggagaggaagctggag
gagcaggagagaggagatgaagaacagaagaaggaacagcccagcgttgctcttaacagt
ctgaagatgatgttcgagaaaggagaacccaaggtggttcaggtacgaggaggacggagc
agcacttcagacgatatggatcttcgaccaccagaaaaaggtcgcgtctcggttgagcgc
tccaaatctctgagggacagaatggctcagtaccaggccgccgtgtccaaggacatccga
ccgttacccaacccgataaacctggtcgacatcgagatcaagagtacaagggtggatcac
aaggaaaatgttccacccggtggtggagagcaggccgagagctcaacctcagagtccatc
agtaccaaacccaacggggttttagctgatgcaggaagctccggcacggcggcgtctgaa
ccggaaaccaacgacgcgccgaaattcgttcgagggcagaagtttcgttcgacggtcaga
gagacgtgtgtcgcctgcagtaagaccgtttacccgctagagaaactggtcgctaaccaa
cagaccttccatacggcctgtttccgctgcatccactgcaacacgcgactcagcttagcc
aacttcgcctgtctgcacggcagcatctactgcaaacctcatttcagccagctcttcaag
tccaagggaaactacgacgaagggttcggacaccgtccccataaggagctctggtccccc
cggacagacgaagatgagaatgaagaaagtgaaaagccaaagccgttcagcgtggatcct
ccaccggctaaacccgcgccggagagatcgaccaaccccgactccaccgtggaggaaact
ccgctggtcaaagtcaccgacgtggcggcgtctctggagaccaaaactcagaagcccgtg
aaggaactggagaagtccggcgcctctgctgaaaccaagaggttgaggatcgactggccg
ccgcgcaccgacggcacctcgctgcctaaaatctccggacccccggcggagcgagggaag
agcccggtcagggtcttcaaactgaagtggcccccggaggatgaggcccagaccaactca
gagagcacggagcgggtggagctgaagaacctgcgccgctgcacctccctaaaggagcgg
agtcgacccttctccgtagcgccgcgcctggaatcggcagccaatcaggagcctcagcgc
tcgccaaggtccgcctctctgaggcgtggctccctggaggagctccgtacggcttccaga
gtccagagggagaaaccggaggaggacggggaacccagtgagagcacaaacaccagcagt
gagcctgaggttcctcacaaaccagaggagaccccgaaggtacctcagtccatcctgaag
aagccgagcagaaccgcgagcatcgagcagcaaagcgaagctcagaaggttccagaaaaa
cctcaagaacttttacaagtgtctgatcaacccaccttggaggagaaaagcacccgggcg
ggtcaggacgacgcccgcagtgaggcggaggaaccggagaacggtctcagcgtggaggag
atgatcaagaagaaccgatactacgacgaggaggacgaagaggtgaacgacgtctga
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