Trichomycterus rosablanca: 134302062
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Entry
134302062 CDS
T09921
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134302062 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134302062 (nfasca)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
L1 family
134302062 (nfasca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_4
Ig_5
Pur_ac_phosph_N
Ig_6
C2-set_2
Motif
Other DBs
NCBI-GeneID:
134302062
NCBI-ProteinID:
XP_062843133
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Position
24:complement(7932895..8028202)
Genome browser
AA seq
1360 aa
AA seq
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MWLKVHWGPLAVLSITALLWKEAAPIEVPLDPRIQQDLKQPPTIVKESAKDYIVDPRDNI
IIECEAKGNPVPTFWWRRNGKFFNLERVEKDYHVSMRKRSGTLEISFRNNGKPEDFEGEY
QCFALNDFGIAISNKILLRVSKAPLWPKENLEPVAVSEGSPLVLACNPPPGLPPPKTFWI
NSAMMPIKQDKRVSMGLNGDLYFSNVLATDSNTDYSCNARFLFTNTIQQKNPFTLKVQTK
EPYNETLSFLNDTYVYGARNIPETTPTFQSPSGTTSSKIVLRGEELLLECIAAGVPTPGI
KWFKKGGDLPEKKVKLESYNKTLRIVSVSEEDSGEYVCMASNKIGSIRHSISVQVKAAPY
WLNKPSNLVLAPNENGQLVCLASGNPKPSIQWLVNGESIESSPENPSRQVVGDSIIFTSV
QIGSSAVYQCNASNEHGYLLANAFVSILDMAPRLLGPRNQLIKVIENHPTFLNCPFFGSP
LPYVRWFKNGVNIALDDKRYSIHDNGTLEIKQARPEDQGTYNFVASNILGKAEDQVRLEV
KEPTRIVRAPEHLSVNRGRVARFDCKVKHDHTLAITVTWLKNYKPLHFGWLSKYKKDEES
MSITNVNSEDEGTYTCTVTTELDQDSASARLTVQDNGSLSPSVTSASAARPDPPQDLELS
DLSARSVRLTWVPGNENNSPVTEFLVQYEENRWKPGEWQNLSSYAGDQNSVSLSLSPFIN
YQFRVIAINSVGQSQPSPPSARYQTSGAPPFIFPNGLKGWGTKKTNMEITWKPLLDTERN
GPELRYVVSWRRKDSQEEWNSVTTTSTKHEVSNTETYVPYEIKIQAVNDFGPGPQSNIVI
GYSGEDRPSEAPDDLRVSKINSSKVNVHWIPVNPSSVNGEFKEYKLYYWRESSLANGIKV
NKEKQTKSFFSDVAQNTGLLTDLVPYSKYKMYMVVANNKYEGPHSNIAEFQTKEGVPDAP
KFFKIVQRNTETIRLQWDKPVEPNGIVIGYTLQYRTVNGTQVGSPQFLNFFPNKTDYTIR
LPDRFTHYRFNLSARTQVGPGEVFSVESPQFSSDDFITSVIDSTDALVFATLLPPLFPTT
IPPTTISTSTTTTTAPTTAATPTTAPTTTTTTSGVTTAPTKRVDKNMPVPNIKIWNLTVD
PNSDYANVSWKHNFPIHSSEFALEFTLDSNGSTKTVMFKHGPPIKLTGLTAGAKYRLRVY
THEPRVSSEFIDFETSGAYSNDHADIATQGWFIGLMCAIALLILILLIVCFIKRSRGGKY
AVRDKKDLPLDAVNHKDQDGSFDYHSDEDNKPLQGSQTSLNGNVKESDDSLVDYGEGGDG
QFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaaggtgcactgggggcctctggctgtgctgtcaatcactgcgctgctgtgg
aaggaagcagctcccatcgaggtcccactagatccaaggatccagcaggacttgaaacag
ccccctactatcgtgaaggagtcggcgaaggactacatcgtcgacccgcgagataacatc
atcatcgagtgtgaagccaaggggaacccggtgccaacgttttggtggagacggaatgga
aaattctttaatctggagagggtggagaaggactaccatgtgtccatgcggaaacgttcg
ggtacactggagatcagcttcaggaacaatggaaagcccgaggattttgagggggaatac
cagtgcttcgccttaaacgactttggcatcgctatatccaataaaatactgctacgggtg
tcaaaggcaccactgtggcctaaggaaaatctggagccagttgcggtcagtgaagggtca
ccacttgtgctggcctgtaaccctcctcctggtcttcctcctcccaaaacgttctggata
aacagtgctatgatgcccataaaacaggacaagcgagtatccatgggcctgaacggggat
ctgtatttctccaacgttttagctacagattctaacactgactacagctgcaacgcccgc
tttctcttcacaaacaccatccagcagaagaatcccttcaccctcaaagtgcagacaaag
gagccttataatgagaccctgtcctttctgaacgacacttacgtgtatggtgcacgtaac
atccctgaaacgacacctaccttccagtcaccttcgggaacaaccagctccaagattgtg
ctccgtggggaagagctgctcctggagtgtatcgctgctggagtgcctactcctggaatc
aagtggtttaagaaaggtggggatttgcctgagaagaaggtcaaactggagagctataat
aaaaccctacgtatagtgtccgtctcagaggaggactctggggaatacgtctgtatggct
agtaacaagatcggcagcattcgccactccatctccgtccaggttaaagctgccccctac
tggttaaataaaccatctaatctggtacttgcgcccaacgagaacggccagttggtgtgt
ctagccagtggaaaccccaaacccagcattcagtggcttgtaaatggagagtcaattgag
agttcaccagaaaacccaagcaggcaagtggtcggtgactcaatcatcttcacatctgtg
caaatcggcagcagtgcagtgtaccagtgcaatgcctcaaatgaacacggctacttgctg
gccaatgcttttgtcagcatacttgacatggctccccggttgctaggacccaggaaccag
ctgattaaggtgatcgagaaccatccaaccttcctgaattgccccttttttggttcacct
ctcccatacgtacgctggtttaaaaatggcgtgaacatcgctttggatgacaaaaggtac
agtatacatgataacggtaccctggagatcaagcaagctcggcctgaagaccaggggacg
tacaatttcgtggcaagcaacatattgggaaaggcggaggatcaagtccgtctggaagtc
aaagaaccaacacggattgtccgggctccagagcacctatctgtcaaccgaggacgtgtt
gctcgctttgactgcaaggttaaacatgaccacacccttgccatcactgtgacctggctc
aaaaattacaagcctttgcattttggatggctgagcaaatataagaaggatgaagaatcg
atgtccattaccaacgtcaacagtgaggatgagggaacctacacgtgtacggtcacgaca
gagttggatcaggactccgcttccgcccgccttactgttcaggacaatggttccctgtct
ccttcagttactagtgcctctgcagcccgaccggatcctcctcaggatctggagctgtct
gacctatcagcacgctctgtccgcctcacctgggtccctggtaatgaaaacaacagtccg
gttacagaattccttgttcagtatgaagagaaccggtggaagcctggcgaatggcaaaat
ctgtccagttatgcaggggatcagaattctgtcagcctgagtctgtcaccctttataaac
taccagttccgtgtgatcgctatcaacagtgtgggccagagccaaccgagtcctccatct
gcccgctaccagaccagtggcgctcccccctttatttttcccaatggccttaaagggtgg
ggcaccaagaaaaccaacatggagatcacttggaagcctcttctagataccgaaaggaat
gggcctgagctacgatacgtggtctcatggaggaggaaagattcccaggaggaatggaac
agtgttaccactactagcacaaagcatgaggtctctaatactgagacctatgttccttat
gaaatcaagatccaggccgtcaacgacttcggaccaggcccacaatcaaacatagtaatc
ggttactcaggagaggacaggccgtcagaagccccggacgatctcagggtgtcaaaaata
aacagcagcaaagtgaacgtgcactggatcccggtcaatcccagctccgttaatggagaa
tttaaagagtacaagctgtactactggagggagtccagtctggcgaatggcataaaggtg
aataaagagaagcaaaccaagagtttcttcagtgatgtggctcagaatactggcctcctc
accgacctcgtaccttacagcaagtacaagatgtacatggtggtggccaacaacaaatac
gaggggccacacagcaacatcgcggagtttcagaccaaagaaggcgtgccagacgctccc
aagttcttcaagatcgtccagaggaacacagaaaccattcgtctacagtgggacaaacct
gtagagccgaatggcattgtgatcgggtatactcttcagtacaggacagttaacgggaca
caagtaggaagtccacagttcctgaatttctttcccaacaagacggattataccatacgt
ctgcccgatcgcttcacccactacaggttcaacctgtcagctcggacgcaggtcggcccc
ggtgaggtgttttccgtggagtctcctcagttctccagtgacgactttataacttcagtg
atcgattctacagatgccttggtctttgccactcttctaccccccctcttcccaactact
atcccacctacaactattagtacctccacaactaccaccactgcccctactactgctgct
acccctactactgctccaactactacaactactacctccggagttacaaccgctcccacc
aagcgggtggacaagaacatgccggtcccgaatataaagatctggaatctgaccgtggat
cctaacagcgactacgctaacgtcagctggaagcacaacttcccgatccacagcagcgag
tttgcgctcgagttcacactggacagtaacgggtctacgaaaaccgtgatgttcaaacat
ggaccccctattaagttgactgggctgacagctggggcaaagtaccggctacgtgtgtac
actcatgagcccagggtcagcagcgagtttatcgatttcgagaccagcggagcttacagt
aacgatcatgccgacattgccacgcagggctggttcatcggactcatgtgtgccatcgcg
ctcctcattctcatcctgctaatcgtttgcttcattaagagaagtcgaggagggaagtac
gcagtaagagataaaaaagacttacctttggatgccgtcaatcacaaagaccaggacgga
tcatttgattaccacagcgacgaggacaacaagcctctgcagggaagtcagacatctctg
aacggcaacgtcaaggaaagcgacgacagcctagtggactacggagagggaggagacggc
cagttcaacgaagacgggtccttcatcggccagtacactgttaaaaaggacaaggaggag
actgaggggaacgagagctcggaggccacgtcgcccgtcaacgccatctattccttggcg
taa
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