Trichomycterus rosablanca: 134302103
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Entry
134302103 CDS
T09921
Symbol
si:dkey-222f2.1
Name
(RefSeq) intermediate filament protein ON3
KO
K07605
type II keratin, basic
Organism
trn
Trichomycterus rosablanca
Pathway
trn04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134302103 (si:dkey-222f2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134302103 (si:dkey-222f2.1)
04147 Exosome [BR:
trn04147
]
134302103 (si:dkey-222f2.1)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
134302103 (si:dkey-222f2.1)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
134302103 (si:dkey-222f2.1)
Exosomal proteins of other body fluids (saliva and urine)
134302103 (si:dkey-222f2.1)
Exosomal proteins of colorectal cancer cells
134302103 (si:dkey-222f2.1)
Exosomal proteins of bladder cancer cells
134302103 (si:dkey-222f2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
CENP-F_leu_zip
AAA_13
SlyX
DUF4094
PUMA_CC
TPR_MLP1_2
Phage_GP20
Fib_alpha
CCDC113_CCDC96_CC
ADIP
Motif
Other DBs
NCBI-GeneID:
134302103
NCBI-ProteinID:
XP_062843208
LinkDB
All DBs
Position
24:complement(2373332..2386273)
Genome browser
AA seq
476 aa
AA seq
DB search
MIYVTDQTSLTQIGLAALPRLSIIHLIRFFRSFFVDAHKIRTMSLRTKRISSSSSVRSSG
KLGGYSSGFSTMSLGGTPSFSTSSTYLGAPITSVTVNKSLLAPLNLEIDPNIQMVRTQEK
EQMKSLNNRFASFIDKVRFLEQQNKMLETKWDVMLSQTLSRSNIEPMFEAYMTNLRRQLD
VVNNDKMKLDGELRNMQGLVEDFKHKYEDEINRRNNLENDFVILKKDVDSGYLVKADLED
KVGALTDEINFLKNIYDEELREMQASIQDTSVIVQMDNSRNLNMDQIVADVKAQYEEIAA
RSREEAEAWYKSKYDQMESQATQYGNELRNTKAEIGDLNRMISRLQTEIESVKAQRTNLE
NQIAEAEERGELTVKDARIRLRDLEEALQRAKQDMARQLREYQELMNVKLALDIEIATYR
KLLEGEEDRLGQASVSIQSVSSYSSKGMNGVQQFSSPSKVVIKTTEVRDNTRYSSH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatttatgtaactgatcaaacaagtctcacacagatcggactcgctgcacttccacgg
ctcagcatcatccacctgatcaggttcttccgttccttcttcgtggacgctcacaaaatc
cgaaccatgagtctgaggaccaagcgtatcagctcgagcagctcggtgagaagcagcggg
aaactcggtggctacagcagcgggttcagcaccatgtccctcggaggcacgcccagcttc
agcaccagcagcacctacctgggcgccccgataaccagcgtgacggtcaataagagcctc
ctggcacctctcaacctggagatcgacccaaacatccagatggtccgcacacaggagaag
gagcagatgaagagcctcaacaaccgctttgccagcttcatcgacaaggtaaggttcctg
gagcaacagaacaagatgctggagaccaaatgggacgtcatgctgagtcaaaccctgagc
aggtccaacatcgagcccatgttcgaggcctacatgaccaatctgcgcaggcagctggat
gtggtgaacaacgacaagatgaagttggacggagagctgaggaatatgcaggggctggtg
gaggacttcaagcacaagtacgaggacgagatcaacaggagaaacaacctggagaacgac
tttgtgattctgaaaaaggatgtggattctgggtacctggtgaaggctgatctggaggac
aaagtgggcgctctgaccgatgagatcaacttcctcaagaacatctatgatgaagagctg
cgtgagatgcaggccagcatccaggacacatcggttatagtgcagatggacaactcacgc
aacctcaacatggaccagatcgtggctgatgtcaaggcccagtatgaggagatcgcggcc
aggagccgagaggaagccgaagcctggtacaaatcaaagtatgatcagatggaaagtcag
gccacgcagtacgggaatgagctgaggaacaccaaagctgagatcggcgaccttaaccgc
atgatcagccgcctgcaaaccgagatcgagtccgttaaggcccagcgtactaacctggag
aaccagattgccgaggcggaggaacgtggagagctgaccgtgaaggacgccagaatccgt
ctcagggatctggaggaggcgctgcagagggccaagcaggacatggcacgccagctccgc
gagtaccaggagctcatgaacgtcaagctggctctggacatcgagatcgccacctacagg
aagctgctggagggcgaggaggacagacttggacaggccagtgtcagcatccagtccgtg
tccagttacagttctaaggggatgaacggtgtgcagcagttcagctccccatctaaagtc
gtgatcaaaactactgaggttcgagacaacaccagatacagctcgcactaa
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