KEGG   Trichomycterus rosablanca: 134302109
Entry
134302109         CDS       T09921                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
trn  Trichomycterus rosablanca
Pathway
trn04145  Phagosome
trn04210  Apoptosis
trn04517  IgSF CAM signaling
trn04530  Tight junction
trn04540  Gap junction
trn04814  Motor proteins
trn05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:trn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    134302109
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    134302109
  09143 Cell growth and death
   04210 Apoptosis
    134302109
  09144 Cellular community - eukaryotes
   04530 Tight junction
    134302109
   04540 Gap junction
    134302109
  09142 Cell motility
   04814 Motor proteins
    134302109
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    134302109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trn03019]
    134302109
   03036 Chromosome and associated proteins [BR:trn03036]
    134302109
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:trn04812]
    134302109
   04147 Exosome [BR:trn04147]
    134302109
Messenger RNA biogenesis [BR:trn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     134302109
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     134302109
Cytoskeleton proteins [BR:trn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    134302109
Exosome [BR:trn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134302109
  Exosomal proteins of other body fluids (saliva and urine)
   134302109
  Exosomal proteins of colorectal cancer cells
   134302109
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 134302109
NCBI-ProteinID: XP_062843226
LinkDB
Position
24:complement(1035212..1039018)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgcgagtgtatctccatccacgttggccaggccggcgtccagattggcaatgcctgc
tgggagctgtactgccttgagcacggcattcagcccgatggacagatgcccagcgataag
accatcggcggaggcgacgactcctacaacaccttcttcagcgagaccggagccggcaag
cacgtccccagagccgtgtttgtggatctggagcccaccgtcatcgatgaggttcgttcc
ggcacttaccgccagctcttccaccccgagcagctgatcactggaaaggaggatgccgcc
aacaactatgcccgcggtcattacaccattggcaaggagatcatcgacctggtgctcgac
aggatccgcaagctgtctgaccagtgcacgggtctccagggcttcctggtcttccacagc
tttggaggtggcaccggttccggtttcacctccttgctgatggaacgtctctccgtcgac
tacggcaagaagtccaagctggagttctccatctaccccgccccacaggtctccaccgcc
gtggtggagccgtacaactccatcctgaccacccacaccaccctggagcactcggactgc
gccttcatggtcgataacgaggccatctatgatatctgtcgtaggaacctcgatatcgat
cgtccttcctacaccaacctgaacaggctgatcagtcagatcgtgtcctcgatcacggcc
tctctgaggttcgatggcgccctgaacgtcgatctgaccgaattccagaccaacttggtg
ccctaccctcgtatccacttccccctggccacatacgcccccgtgatctcggccgagaag
gcttaccacgagcagctctcagtggccgagatcaccaatgcctgcttcgagccggccaac
cagatggtgaaatgtgacccgcgtcacggcaagtacatggcctgctgcctgctgtaccgc
ggtgacgtcgtacccaaagacgtcaacgccgccatcgccaccatcaagaccaagcgcacc
atccagttcgtggactggtgccccactggtttcaaagtgggtatcaactaccagccaccc
accgtggtgcccggcggagacctcgccaaggtccagagagccgtgtgcatgctgagcaac
accacggccatcgccgaggcctgggccaggctcgaccacaagttcgacctgatgtacgcc
aagcgcgctttcgtgcactggtacgtaggagagggcatggaggagggagagttctccgag
gccagggaggacatggccgccctggagaaggattacgaggaggtcggtgtagattccgtc
gagggagagggtgaggaggagggcgaggagtattaa

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