Trichomycterus rosablanca: 134302176
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Entry
134302176 CDS
T09921
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134302176 (prdm13)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134302176 (prdm13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-BED
zf-C2H2_7th_ZNF462
zf-H2C2_5
zf-C2H2_15
zf-C2H2_6
FYDLN_acid
Zf-C2H2_ZNF451
DUF2464
C2CH-3rd_BIRD-IDD
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
134302176
NCBI-ProteinID:
XP_062843283
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Position
25:complement(277835..285000)
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AA seq
567 aa
AA seq
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MHGCRTPPVGVFADGSIPAGARIGPVPGIFRLGKCASDRKEVGVKKKVRMVRGELVDECG
AAVSDWILLIRSARSSQEQNLEAVSDLPGGQIFYRVLREISAGEELSAWYSESLAQWFHI
PTTATPTHDERGEERYICWYCWRIFRYPNTLKAHVHFHCALNTRAPVGHDHAPRGPNNNF
SRSPKSGDIPSGANTSPFTNKAALPRRSSREDQDRALDMSVTSTARHHPGLVGGSSCVPF
QPGAQSAFIPAGLNKMFSSPEEVANEDGKADALGFSKLAYAPKGGRAPADPLPPLPRGFS
LLSHFEETSAFKHVPPGTRYPNIPPGFPLERFSLPPSYNGDCGSMPIVPFTVYNGELLYG
SPYYPLKFHLLRYPDSVSSYFGGPALGTDVNPACSSVDRDMSAHVDKTRARLEPMPSMTH
PAVSTGTNVVMGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPFGDPSN
LNKHVRLHAEGNTPYRCDYCGKVLVRRRDLERHIKSRHPGQQGIKKRSPEEDMHPDDHTE
EQKSDEDSDVDVCFTDDQSDQELSQKL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctgccgcactcctccggtcggcgtgttcgcggacggcagcatcccggccgga
gcgcggatcggtccggtacccggaatctttcggctgggcaagtgcgcatctgaccggaaa
gaggtcggagttaaaaagaaggtgcggatggtgagaggagaattggtggatgaatgcggt
gctgctgtatcagactggattttattaataagatctgctcggagcagccaagaacaaaac
ctggaggctgtgtcagatttacctggcggacagatattttaccgggttctgagggagatc
tcggccggtgaggagcttagtgcttggtactccgagagcctggcacagtggttccatata
cccaccactgccacacccacccacgacgagagaggtgaagagcgctacatctgctggtac
tgctggcggattttccgttacccaaacacactaaaggcgcacgtgcacttccactgcgct
ctcaacaccagagcacccgtgggccatgaccacgcgccacgaggacccaacaacaacttc
agtcgctctccaaagtcaggtgacatcccgagcggtgccaacacgtcaccgtttaccaac
aaggcagctttaccgcggcgaagtagccgggaggatcaggaccgagcgctcgacatgagc
gtgacctctacggcgagacatcatcccggactcgtcggcgggagctcatgtgtgccgttc
cagcctggcgcacagtcggcattcatacccgcgggactcaacaaaatgttctcctcacct
gaagaggtcgctaacgaagacggaaaagcggatgccctcggcttcagcaagctagcttat
gccccgaagggtgggcgcgcccctgcagatccgttgcctcctctgccgcgagggttttcg
ttactgtcacattttgaggagacctcagcattcaagcatgtacctcctggaacacggtac
cctaatatcccgcccgggttccccctcgagcgtttctcattgcccccgtcttataacgga
gactgtggcagcatgcccatcgtgcccttcactgtatataatggggagctgctctacggg
tcgccatattacccgctcaaatttcaccttctccgctacccggattctgtttcttcatac
ttcggtggtccagcgcttggcactgatgtgaatccagcctgcagctcggtggacagggac
atgtccgcacacgtcgacaaaacacgagccagactcgagcccatgccctccatgacacac
ccagcagtctcgactggcacaaacgtggtcatgggcaaacccaaaaagggtcacttgtgt
ctgtactgtggaaaactgtactcccggaagtatggacttaagatccacatgaggacgcac
accgggtacaaaccgctcaagtgtaaagtctgcttccggccttttggtgacccgagcaac
ctcaacaaacacgtacgcttgcatgccgagggaaacacgccctaccggtgcgactactgc
ggcaaggtgctggtacgccgccgagacctcgagcgccacatcaagtccaggcacccagga
caacagggcatcaaaaagaggtcacccgaggaagacatgcacccggacgatcataccgag
gaacaaaaaagtgatgaggatagcgatgtggacgtgtgctttacggacgatcaaagtgac
caagagctgagtcaaaaactatag
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